Citrobacter sp. XT1-2-2: M4I31_17820
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Entry
M4I31_17820 CDS
T09034
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix00900
Terpenoid backbone biosynthesis
cix01100
Metabolic pathways
cix01110
Biosynthesis of secondary metabolites
Module
cix_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
M4I31_17820 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cix01006
]
M4I31_17820 (ispA)
Enzymes [BR:
cix01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
M4I31_17820 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
M4I31_17820 (ispA)
Prenyltransferases [BR:
cix01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
M4I31_17820 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
UQX58261
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All DBs
Position
3721472..3722371
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AA seq
299 aa
AA seq
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MDFTQQLQACVEQANQALSRFITPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGQMFG
VSLSTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL
AFSIISDAPMPEVSDRDRIAMISELAQASGIAGMCGGQALDLEAEGHQVALDALERIHRH
KTGALIRAAVRLGALSAGDKGRECLAILDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARNKARDLIEDARQSLSLLAAQSLDTSALEALADYIIQRDK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggattttacgcagcagctacaggcttgcgttgagcaggccaatcaggcactgagccgt
tttatcacgccactgccctttcagaacactcccgtggtcgaaaccatgcaatatggcgca
ttattaggcggtaaacgtctgcgcccattcctggtgtatgcgaccggtcagatgtttggc
gtcagcctgagtacgcttgatgctcccgctgccgccgtcgagtgcatccatgcctattcg
ctgatgcatgatgatttacccgcgatggacgacgacgacctgcgccgcggtctgccaacc
tgccatgtaaaatttggcgaggcaaacgcgatcctggccggagatgcgctgcaaacgctg
gcgttttccattatcagcgacgccccgatgccggaagtatctgaccgtgaccgcatcgcg
atgatctctgaactggcgcaggccagcggtatcgccggtatgtgcggcggccaggcgctg
gatctggaagcggaaggtcatcaggtagcgctggatgcgctggagcgtattcaccgccat
aaaaccggggcattgattcgtgccgccgtgcgtctgggtgcattaagcgcaggcgataaa
gggcgggaatgcctggcaatactcgacaaatacgcagaaagcatcggtctggccttccag
gttcaggatgacatactggatgtggtaggcgatactgcaacattgggtaaacgtcagggt
gctgaccagcagcttggcaaaagtacctatcctgcacttctgggtcttgagcaagcccgg
aataaagcccgggatttaatcgaagatgcccgccagtcgttaagtttgctggccgcgcag
tctctcgatacctcggcactggaagcgctagcggactatataatccagcgtgataaataa
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