Citrobacter sp. XT1-2-2: M4I31_17980
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Entry
M4I31_17980 CDS
T09034
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cix
Citrobacter sp. XT1-2-2
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cix03400
]
M4I31_17980 (sbcC)
DNA repair and recombination proteins [BR:
cix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M4I31_17980 (sbcC)
Archaeal homologous recombinant proteins
M4I31_17980 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
nSTAND3
AAA_21
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
UQX58292
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All DBs
Position
3756695..3759844
Genome browser
AA seq
1049 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVRGEAYRAFWSQNRARNQPEGNLQAPRVELARCA
DGKILADKVKDKLEMTAELTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKAARTELEKLQAQANGVALLAAEQVQSLTESLQVLTDEEKQYLASQQ
TQQQHLNWLIRQNELQAEINRHQQALQAAKQAQEDAQPQLAALSLAQPARALRPHWERIE
EQTATIARTRQNIQEVNTRLQSSLALRERIRQQAHTQSTALLAGQQTLIDWLNEHDRFRL
WGSELAGWKALLAQHSDASAQLHQWQQLRENDTRKLDALALPTLTLSPQEVTAALAQHVQ
LRPLRQRLSNLHGQIAPKQKQLAQLRATLVQRQQELTQRNAVLAEKRQRYKDKNQQLADV
RIICEQEARIKDLESQRALLQSGMPCPLCGSTTHPAIERYQTLELSVNQARREALEKEVK
TLADEGSTLRGQLEAITQQLQRDEREAQTLSQEEQALTQEWQTVTTSLNVTLQPQDDIAP
WLAAQEEYEQQLHQLSLRHTLQAQITAHTGQITQLQQQIDQRQATLTAELARHGLSLPAE
DDANSWLSERAREAQMWQQRQNELTELQARIAQLTPLLETLPESDTLSASTENLSLENWR
QVHDDCLSLQGQWQTLQQQEAQDLQRAAEIQAQFDAALQASIFADRDAFVTALLDEETFS
RLEQLTQSLEKQQQQAQTLLNQAQQALASHHQQLPTGADLTLSAQQLRDALAQLTQQLRE
NTTRQGEIRQQLKQDTEHRQQQQALMQEIENVTQQVEDWGYLNALIGSKEGDKFRKFAQG
LTLDNLVWLANNQLTRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDKLFAVGSA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgtttgaaaaacctcaattctctgaaaggagaatggaaagtc
gatttcacggctgagccctttgccagcaatgggctgttcgccatcacgggtccaacgggc
gcgggaaaaaccacactgctggacgccatttgtctcgcgctgtatcacgaaacgccgcgg
ctcaataccgtgtctcagtcgcaaaacgatctgatgacccgcgacaccgccgagtgtctg
gccgaggtcgagttcgaagtccggggcgaagcctatcgtgcattctggagccagaaccgc
gcgcgcaatcagcctgaaggcaacctacaggctccgcgcgtagaacttgcccgctgcgcc
gacggtaaaatcctcgccgataaagtcaaagacaagttggaaatgaccgccgaacttacc
ggcctggattatggtcgtttcacccgttcgatgctgctgtctcaggggcaatttgccgca
tttctcaatgccaaaccgaaagagcgtgccgaactgctggaagagctgacggggactgag
atctacggccaaatttccgccatggtgtttgaaaagcataaagcagcgcgtacagagctg
gaaaaactgcaggcgcaggccaacggcgtggctctgctcgctgcggagcaggtgcagtcc
ttgacagagagtttgcaggtacttactgacgaggaaaaacaataccttgcaagccagcag
actcagcaacagcatctcaactggctcattcggcaaaatgagctacaggcagaaatcaac
cgtcaccaacaggcgttacaggccgctaaacaggcgcaagaagacgcgcagccacagctg
gcggcgctgagtctggcacaaccggccagagcgttacgcccgcactgggagcgaatcgag
gaacaaacggctacgatagcgcgtacgcggcagaatattcaggaagtgaatactcgctta
caaagcagcttagcgctgcgcgagcgcatccgtcagcaggcgcacacgcagtcgaccgcc
ttgctcgctggacagcagacgttaatcgactggctgaacgaacacgatcgcttccgcttg
tggggcagcgaactggctgggtggaaggccctgctggcgcaacactccgacgccagcgcc
cagctacaccagtggcagcagttacgggaaaacgacacgcgtaaactggatgcgctggcg
cttcccacgctgactctttcaccgcaggaggtcacggcggcgctggcgcaacatgtgcag
ctccgtccgttacgccagcgtctgagcaatctgcatgggcaaatcgcccctaagcaaaag
cagctggcgcagttacgcgcgacgctggtgcaacgtcagcaagagctaacgcagcgcaac
gcggtgcttgccgaaaaacgtcagcgctataaagataaaaatcagcagcttgccgatgtg
aggatcatttgcgagcaggaagcccgcatcaaagatttggaaagccagcgggcattattg
caatccggcatgccttgtccgctgtgcggctccaccacacatccggcgattgagcgctat
caaacgctcgaactgagtgttaatcaggcacgacgtgaagcactggaaaaagaggttaaa
accctggctgatgagggctcaacgttacgcggtcagcttgaggccataacccagcaactc
caacgggatgaacgtgaagcacagacgctttctcaagaggagcaagcgcttactcaagag
tggcagacagtcactaccagccttaacgtgacgctgcaaccgcaggatgatatcgccccg
tggcttgccgcccaggaagaatacgaacaacaacttcaccagttgagcctgcgtcatacc
ctgcaggcgcaaatcacggcgcataccgggcagattacccagctccagcagcaaattgac
cagcgccaggcgacgttaaccgccgagctggcccgccatggactgtcccttcctgctgaa
gatgacgctaattcgtggctgagtgagcgggcgagagaagcgcaaatgtggcagcagcgc
cagaacgaactcaccgagttacaggcgcgaatagctcagctcacgccgttgctggaaacg
ctgcctgagagcgatacgctgtctgcaagtactgagaatctgtcgctggaaaactggcga
caggtgcatgacgattgcctgtctttacaaggccagtggcaaaccttgcaacagcaggag
gcgcaggacctacagcgcgccgcagaaattcaggcacagtttgatgccgcactgcaggcc
agcatctttgccgatcgtgacgcctttgttaccgccctgctggatgaagaaacctttagc
cgtctggagcagttaacgcaatcgctggaaaagcagcagcagcaggcacaaacgctgctt
aatcaggctcagcaggcgctggcgagccatcaccagcagttgccaaccggggcggatctc
acgctctcggcacaacagcttcgcgacgcgctggcgcagctcacccagcagctacgggaa
aataccacgcgtcaaggcgaaattcgccagcagctgaaacaggatactgaacatcgccag
cagcagcaggcgctgatgcaggagattgaaaacgtcacgcagcaggttgaagactggggc
tatctgaatgcgctaatcggctcgaaagagggagataaattccgcaagtttgcccaggga
ctgacactcgataacctggtgtggcttgccaacaaccaactcactcgtctgcatggtcgc
tatctgttacagcgtaaggccagcgaagcgctggagctggaagtggttgatacctggcag
gccgatgccgtgcgcgacacccgtacgctttccggcggcgagagcttcctcgtgagtctg
gcgctggcgctggcgttatccgatttggtcagccacaaaacgcgaattgactccctgttc
ctcgatgaaggtttcggcacgctggacagcgaaacgctggataccgcgctggacgcgctc
gatgcgctgaacgccaccggcaaaaccattggagtgatcagccacgttgaagcgatgaaa
gaacgcattccggtgcagatcaaggttaaaaaaatcaacgggctgggctacagcaaactc
gacaagctgtttgcggtgggatcagcataa
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integrated database retrieval system
