Citrobacter sp. XT1-2-2: M4I31_18295
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Entry
M4I31_18295 CDS
T09034
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
cix
Citrobacter sp. XT1-2-2
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cix03000
]
M4I31_18295 (prpR)
Transcription factors [BR:
cix03000
]
Prokaryotic type
Helix-turn-helix
Other families
M4I31_18295 (prpR)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
HTH_psq
AAA
AAA_2
AAA_7
ResIII
HTH_23
Xre-like-HTH
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UQX58350
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Position
3838363..3839973
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AA seq
536 aa
AA seq
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MADTHLPPRVNDDKPVIWTVSVTRLFELFRDISLEFDHLATITPIQLGFEKAVAYIRKKL
ATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQALAKAGKLTSSIGVITYQETIP
ALIAFQKTFNLQLEQRSYITEEDARGQINELKANGTQAVVGAGLITDLAEEAGMTGIFIY
SAATVRQAFVDALDMTRLTLRRNGQYASGDMLRTRYALGDMRGHSAQMEQVRHTIMLYAR
SRAPVLIQGETGTGKELAAQAIHREYFTRQENRRGKPSPPFVAVNCGAITESLLEAELFG
YEDGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPI
PVDVRVISATHCNLEQEMKQGEFRTDLFYRLSILRLKLPPLRERLPDILPLAEGFLKQSL
AELDVPFSEPVRKGLALSQPTLLNYGWPGNIRELRNMMERLALFLSVEPQPELNVQFLQQ
LLPELATVAAPPQVTSSLTPQQVLAQFNGDKTAAARYLGISRTTFWRRLKENPPVQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgcatcttccgccgcgggtgaacgacgacaaaccagttatctggacggtt
tcggtcacgcgcctgttcgaactgtttcgcgacatcagtctggagttcgaccacctggcg
accatcacccctattcagctgggtttcgaaaaagcggtggcctatatccgtaagaagctg
gccactgagcgttgcgatgccatcattgcggcaggctccaacggcgcgtatctgaaaagc
cgtttatcgatcccagtaatcctgattaaacccagcgggtttgacgtactccaggcgctg
gcgaaagcgggaaaactgacctcgtcgattggcgtcattacctatcaggaaaccatcccc
gcgctaatcgcctttcaaaagaccttcaatttgcagctcgaacagcgcagctatatcacc
gaagaagatgcccgtggacaaatcaacgagctgaaggccaacggtacccaggcggtggtc
ggcgcggggttgattaccgacctggcggaagaagcgggcatgaccggcatttttatctat
tcggcggccaccgtgcgtcaggcttttgtcgacgcgctggatatgacccgtctgacgctg
cgcagaaacgggcaatacgcctctggcgatatgctgcgcacccgctatgcgctgggagat
atgcgcggtcactctgcgcaaatggaacaggtgcggcacaccattatgctctacgcccgt
tcgcgtgcgccggtgctgattcagggtgaaaccggcacaggtaaagagctggcggcgcag
gctattcatcgtgagtattttacgcgtcaggagaatcggcgcggaaaaccttcgccgccg
tttgttgccgtcaactgcggcgccatcaccgaatcattgctggaagcggagctgttcggc
tatgaggatggcgcgtttaccggctcccgccggggaggacgcgcgggcctgtttgaaatt
gcccacggcgggacgctgtttcttgatgagataggcgaaatgccgctaccgttacaaacc
cggttattgcgcgtactggaagaaaaagaggtcacccgggtcggtggacatcagccgatt
ccggtcgatgtgcgggtgatcagcgccacgcactgcaacctggaacaagagatgaaacag
ggagaatttcgtaccgatctgttttaccgcctgagcattctgcgccttaaactgccgccg
ctacgcgagcggctgcccgatattctgccgctggcggaaggctttttaaaacagtcgctg
gcagaactggatgtaccgttttctgaacccgtgcgtaagggattagccctgagccagcct
acgctgctcaattatggctggcccggaaatatccgcgagttacgcaatatgatggagcgt
ctggcgctgtttttaagcgtcgaaccgcagccggagctgaacgtacaatttctacagcag
ttgttacctgaactggccactgttgctgccccaccgcaggtcacttcatcactgacgccg
cagcaggtgctggcgcaattcaatggcgataaaaccgcggctgcacgatacctcggtatc
agcagaactacgttctggcgcaggctaaaagaaaacccgccagtgcaatga
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