Citrobacter sp. XT1-2-2: M4I31_20915
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Entry
M4I31_20915 CDS
T09034
Symbol
treR
Name
(GenBank) trehalose operon repressor TreR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
cix
Citrobacter sp. XT1-2-2
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cix03000
]
M4I31_20915 (treR)
Transcription factors [BR:
cix03000
]
Prokaryotic type
Helix-turn-helix
LacI family
M4I31_20915 (treR)
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_31
HTH_23
HTH_IclR
HTH_7
MarR_2
Peripla_BP_4
AAA_18
HTH_Tnp_ISL3
HTH_Crp_2
MarR
HTH_26
TrmB
HTH_28
CENP-B_N
HHH
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UQX58830
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Position
4393236..4394183
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPELVEEHLGMLRRRNID
GVVLFGFTGITETMLTSWQDSLVLLARDAKGFASVCYDDEGAIHTLMQRLYDRDHRHISF
LGVPHSDVTTGKRRHEAYLAFCKKHKLHPVAALPGLAMKQGYEQAANVITPETTALVCAT
DTLALGVSKYLQEQRIDNLQLASVGNTPLMKFLHPEIITVDPGYAEAGRQAASQLIEQIN
GRSEPRQIVIPSTLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccattaaagacatcgcccgcttaagcggcgtggggaaatccacg
gtttcccgcgttctcaacaacgaaagcggcgtcagcgaacgtacccgcgaacgcgtcgaa
gcggtgatgaatcagcacggtttttccccttcccgctccgcacgcgccatgcgtgggcaa
agcgacaaggtggtggcgattatcgtcacgcgcctggattctctttcagaaaatctcgcc
gtgcagaccatgctgcccgctttttatgaacagggttacgatccgatcatgatggaaagc
cagttctcgcctgaactggtcgaagaacatctgggcatgctcagacgccgtaatattgac
ggtgtggtgctgtttggttttaccggcattaccgaaacgatgctcacctcctggcaggat
tctctggtgctgctggccagagatgccaaaggctttgcctccgtctgctatgacgatgag
ggcgctattcataccctgatgcagcgtttatacgatcgcgaccaccgccatattagcttt
cttggcgtcccccatagcgacgtgaccaccggtaagcgccgtcatgaagcctacctggca
ttctgtaagaaacacaaactgcatccggttgccgcgctaccgggcctggccatgaagcag
ggttatgagcaggccgccaatgtcatcaccccggaaaccaccgccttagtctgcgcgacg
gatacccttgcccttggggtcagcaaatatctgcaggagcagcggattgataatctgcag
ttggcgagtgtgggcaacacaccgctaatgaaattcctccatccggaaattatcaccgtc
gatcccggttacgccgaagccggacgacaagcggcctcgcagctgatcgagcagatcaat
ggccgcagcgaaccacggcaaatcgttattccttccaccctcgcctga
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