Citrobacter sp. XT1-2-2: M4I31_23370
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Entry
M4I31_23370 CDS
T09034
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix00071
Fatty acid degradation
cix00280
Valine, leucine and isoleucine degradation
cix00310
Lysine degradation
cix00362
Benzoate degradation
cix00380
Tryptophan metabolism
cix00410
beta-Alanine metabolism
cix00640
Propanoate metabolism
cix00650
Butanoate metabolism
cix00907
Pinene, camphor and geraniol degradation
cix00930
Caprolactam degradation
cix01100
Metabolic pathways
cix01110
Biosynthesis of secondary metabolites
cix01120
Microbial metabolism in diverse environments
cix01200
Carbon metabolism
cix01212
Fatty acid metabolism
Module
cix_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
M4I31_23370 (fadB)
00650 Butanoate metabolism
M4I31_23370 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
M4I31_23370 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M4I31_23370 (fadB)
00310 Lysine degradation
M4I31_23370 (fadB)
00380 Tryptophan metabolism
M4I31_23370 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
M4I31_23370 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M4I31_23370 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M4I31_23370 (fadB)
00930 Caprolactam degradation
M4I31_23370 (fadB)
Enzymes [BR:
cix01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
M4I31_23370 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
M4I31_23370 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
M4I31_23370 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
M4I31_23370 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UQX59277
LinkDB
All DBs
Position
4906767..4908956
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQPNLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKHEKLLDGAIAILRQAINGDLDWRAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTSEARALVGIFLNDQFVK
AKAKKLTKNIEAPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKMAGVISTIHPTLDYSGFERVDVVVEAVVENPKVKKAVLAETEDKVRP
DTVLASNTSTIPINELASVLKRPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW
ASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMSAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDNKGKP
KKEEDAAVDGLLAEVSQPKRDFSDDEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPAGLRDKARHNEPYYPQVEPA
RPVGSLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgcccctggttcggtcaataaactcgacacggccaccgttgccagcctgggc
catgcgcttgacgtgctggaaaaacaaccgaatttaaaagggctgctgctgcgctctaac
aaagcagcctttattgtcggtgccgatatcaccgaattcctttcattgttcctcgtgcct
gaagaacagttgagccagtggctgcattttgccaacagcgtctttaatcgtctggaagat
ctgcctgttccgaccctctcagcggtaaatggctatgcgctgggcggcggctgcgagtgt
gtgctggcgaccgattaccgtctggcaacgccggacctgcgcatcggcctgccggaaacc
aagctgggcatcatgccaggctttggcggatccgtacgtatgccacgtatgctgggcgcg
gacagcgcgctggaaatcattgctgcaggtaaagatgttggtgctgagcaggcgctgaaa
atcggcctggtcgatggcgtcgtgaaacacgagaaactgcttgatggcgcgatcgccata
ttacgtcaagcgattaacggcgatctcgactggagagccaaacgccagccgaaactggaa
ccgttgaaactcagcaaaattgaagcggcgatgagctttactatcgccaaaggtatggtg
gcgcagacggccgggaagcattatcccgcaccaatcactgccgtgaaaacgattgaggcg
gcagcccgttttggccgtgaagaagcgctgaacctggaaaataaaagttttgttccactg
gcgcacaccagtgaagctcgcgcattggttgggatcttccttaacgatcagttcgtgaaa
gccaaagccaaaaagctcaccaaaaatattgaggcgccaaagcaagcggcggtgctgggc
gcgggcattatgggcggcggtatcgcttaccagtcggcctggaaaggcgtgccggttgtg
atgaaagatatcaacgacaaatcattaacgctgggcatgaccgaagcggccaagctgctg
aacaaacagctcgagcgcggtaaaattgacggcctgaaaatggcgggcgtgatttccact
atccatccaaccctcgactatagcggcttcgagcgtgtggacgtggtagtcgaagcggtt
gtggaaaacccgaaagtgaaaaaagcggtactggcggaaaccgaagataaggtacgcccg
gacaccgtactggcttcgaacacctcaaccattccaatcaacgaactggccagcgtgctc
aaacgcccggaaaacttctgtggcatgcacttctttaacccggtgcaccgcatgccgttg
gttgagatcattcgcggcgaaaaaagctcagatgaaaccatcgctaaggttgtcgcctgg
gcaagccagatgggcaaaacgccaattgtggtcaacgactgccctggtttcttcgtcaac
cgcgtgctgttcccctattttgccggtttcagccagttgctgcgcgacggagcggatttc
cgcaaagtcgacaaagtgatggaaaaacagtttggctggccgatgggcccggcttatctg
ctggacgtggtggggatcgataccgcgcatcacgcacaggcggtgatgtctgcgggcttc
ccacagcgtatgcagaaagattatcgcgatgcgatcgatgccctgtttgatgctaaccgt
ttcggacagaaaaacggtctcgggttctggcgttataaagaagacaacaagggcaagccg
aagaaagaagaagatgccgccgttgatggtctgctggcagaggtcagccaaccgaaacgc
gacttcagcgatgacgagattatcgcccgcatgatgatcccaatggtcaacgaagtggtg
cgttgtctggaagaaggcattatcgccagcccggcagaagccgatatggcgctggtttat
ggcctgggcttccctccgttccacggcggcgcgttccgctggctggatacgctcggcagc
gcgaagtatctcgatatggcccaacagtatcagcacctaggcccactgtatgaagttccg
gccggtctgcgtgataaagcgcgccataacgaaccgtattatccccaggttgagcctgcc
cgcccggttggcagcctgaaaacggcttaa
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