Citrobacter sp. XT1-2-2: M4I31_23520
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Entry
M4I31_23520 CDS
T09034
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix03420
Nucleotide excision repair
cix03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M4I31_23520 (uvrD)
03430 Mismatch repair
M4I31_23520 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cix03400
]
M4I31_23520 (uvrD)
Enzymes [BR:
cix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M4I31_23520 (uvrD)
DNA repair and recombination proteins [BR:
cix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M4I31_23520 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
M4I31_23520 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UQX59306
LinkDB
All DBs
Position
complement(4937938..4940100)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLTVENNSPYSIMAV
TFTNKAAAEMRHRIGQIMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWFINSQKDEGLRPHHLQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTNNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLDELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRATVSRPVSHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgataaacagcgtgaagcggtggccgcg
ccacgcagcaacatgctggttctggcaggcgcggggagtggtaaaactcgcgtactggtg
caccgtatcgcctggttactgacggtagagaacaactcgccgtactccattatggcggtg
acctttaccaacaaagcggcggcggaaatgcgccaccgtattggtcagatcatgggaacc
agccagggcggaatgtgggtggggacctttcacggcctggcgcaccgtctgttgcgcgcg
caccatatggatgcgaatctgccgcaggatttccagatcctcgacagcgaggaccaactg
cgtctgctcaagcgtctgatcaaagcgatgaaccttgacgaaaagcagtggccgccgcgt
caggcaatgtggtttatcaacagccagaaagatgaagggctgcgcccgcaccatctgcaa
agctacggcaacccggtcgaacagacctggcagaaggtctatcaggcttatcaggaagcc
tgcgatcgcgcggggctggtggatttcgccgaactgctgctgcgcgcccatgaactgtgg
ctcaacaagccgcacattctgcagcactaccgcgaacgctttaccaatatcctggtggac
gaattccaggataccaacaacattcagtacgcctggatccgtctgctggcgggcgacacc
ggcaaggtgatgatcgtgggcgatgatgaccagtcgatctacggctggcgcggcgcgcag
gtggagaacattcagcgcttcctcaacgatttcccgggcgcagaaaccattcgtctggag
cagaactaccgttcgaccaacaatattcttagcgcagctaacgccctgattgaaaataac
aacgggcgcctgggtaaaaaactgtggaccgacggcgtcgacggcgagccgatctcgctg
tattgcgccttcaacgaacttgatgaagcgcgcttcgtggtcaatcgcattaaaacctgg
caggacaacggcggcgcgctggaacagtgcgcgattctgtatcgtagcaacgcccagtca
cgcgtgttggaagaagccttactacaggccagcatgccgtatcgtatctatggcggtatg
cgcttctttgaacgtcaggaaattaaagacgcgctctcctacctgcgtctgatcgctaat
cgcaatgacgatgccgcgtttgagcgtgtggtgaatacgccaacgcgcgggattggcgat
cgtactttagatgtcgtacgccagacttcccgtgaccgccagctaacgttgtggcaggcc
tgtcgtgaactgctgcaggaaaaagccctggccggtcgcgccgccagcgccttacagcgc
tttatggaattgattgacgcgctggcgcaagagactgccgatatgccgctgcacgtgcag
actgaccgggtgattaaagattccggtctgcgcatgatgtacgagcaggaaaaaggcgag
aagggtcagacgcgtatcgaaaacttagacgaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagacttaatgccgctgcaggcgttcctctcccacgccgcgctg
gaagcaggcgaagggcaagcggatacctggcaggacgcggtacagctgatgaccctgcac
tcggcgaaagggctggagttcccgcaggtatttatcgtgggtatggaagaaggcatgttc
ccgagccagatgtcgctggacgaaggcggccgtctcgaagaagaacgtcgcctggcctat
gttggcgtcacccgcgcgatgcagaaactgacgctcacctacgccgaaacgcgtcgtttg
tacggtaaagaggtttaccatcgtccgtcgcgctttatcggcgaactgccggaagcgtgc
gttgaagaggtgcgtctgcgcgccacggttagccgtccggtgagccatcagcggatgggc
acgccaatggcggaaaacgataccggctacaaacttggccagcgggtacgccacgcgaag
ttcggcgagggcaccatcgtcaacctcgaaggtagcggtgagcacagtcgtttgcaggtc
gcgttccaggggcagggcattaaatggctggtggcggcttacgccagactggaaacggtg
tga
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