Citrobacter sp. Y3: HAP28_01180
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Entry
HAP28_01180 CDS
T10856
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ciy Citrobacter sp. Y3
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HAP28_01180 (hmsP)
Enzymes [BR:
ciy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
HAP28_01180 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
QIO37742
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Position
257823..259811
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AA seq
662 aa
AA seq
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MRVSRSLTIKQMAMVAAVVMVFVFLFCTVLLFHLVQQNRYNTATQLESIARSVREPLSAS
ILKADIPGAEAILASIKPAGVVQRADVVLPNQFQALRMSFIPERPVPVMITRLFELPVQI
SLPVYSLERPANPQPLAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLMLTVAISWCVNR
LILHPLRKIARELNNIPQQDLIGHQLALPRLHHDDEIGLLVRSYNLNQQLVQRHSEEQTD
NAMRFPVSDLPNKAFLMGLLEQVVSRQHTTALMIVTCETLRDTAGVLKEAQREILLLTLV
EKLKSVLSPRMVLAQISGYDFAIIAHGVKEPWHAITLGQQVLTIINERLPVQGIQLRPSC
CIGVAMYYGDLSAEQLYGRAVSAAFTARRKGKNQIQFFDPEQMAIAQKRLTEESDILTAL
DNHRFALWLQPQVEMSSGNVVSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVL
EESCRQLAAWQERGITLPLSVNLSALQLMHPNMVSDMLELLNRYRIQPGTLILEVTESRR
IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVDGLPED
NSMVSAIILLARSLNLQMVAEGVETEAQREWLAQAGVEIAQGFLYARAVPAETFEERYLK
HN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagtcgctcgttaacaattaagcagatggcaatggtggctgccgttgtcatg
gtgtttgtgtttctgttttgtaccgttttgctgtttcatctggtgcagcagaaccgctac
aacacggcgacgcaactggaaagtattgcccgttcggtacgtgaaccgctgtctgcctca
attttaaaagccgatattcccggagccgaagcgattcttgccagtatcaaaccggcgggg
gtggtgcaacgggccgatgtggtgctaccgaatcagtttcaggcgctgcgcatgagcttt
atccctgaacggcccgttccagtcatgataacccgactcttcgaactgccggtgcagatc
tcgctgcctgtctattcacttgaacgtcctgcaaatccgcaaccgctggcatatctggtg
ctccaggccgactcattccgcatgtataagtttgtgatgagcacgctgtctacgttagtg
accatttacttacttttatccctgatgctaacagtcgccattagctggtgcgtgaatcgc
ctgattttgcacccgctgcgcaaaattgcccgcgagctgaataacattccgcaacaggat
ttgattggacatcagctggcgttgccgcgtctgcatcatgacgatgagattggtctgctg
gtgcgcagctacaacctcaatcaacaactggtccagcgccacagcgaagagcagacggat
aacgcgatgcgttttccggtctctgacctgccgaacaaagcgttcctgatggggctgctc
gagcaggtcgtgtcgcgtcagcacaccacggcgctgatgattgtcacctgcgaaacgctg
cgcgatacggcgggcgtgctgaaagaggcgcagcgggaaattctgctgctgacgctggtg
gagaaactgaaatcggtgctgtcaccgagaatggtgctcgcgcagatcagcggttacgat
tttgccattatcgctcacggcgtcaaagagccgtggcacgcgatcacattgggtcagcaa
gtactcactatcatcaatgagcgactgccggtgcaggggatccaacttcgcccaagctgc
tgcattggtgtagcgatgtattacggcgatctcagcgccgaacagctctacgggcgcgcg
gtatccgcagcgtttaccgcccggcgcaagggcaaaaatcagattcagttcttcgatcct
gagcagatggcaatcgcccagaaacggctgaccgaggagagcgatattctcaccgcgctg
gacaatcaccgctttgccctctggttgcagcctcaggtggagatgagcagcggcaacgtg
gtcagcgccgaagcgttgctgcgtatgcagcagcccgacgggagctgggaattgccggaa
gggttgattgagcggattgagtcctgcggcctgatggtcaccgtgggccactgggtgttg
gaagaatcttgtcgtcagctcgctgcctggcaggaacgggggatcacgctgccgctgtcg
gtcaatttgtcggcgctccagttgatgcacccgaatatggtgtcagacatgctggaactg
ttaaatcgttatcgtatccagccgggtacgctcattctggaagtgacggagagtcggcgg
atcgacgacccgcatgccgccgtggcgatactgcgtccgttgcgtaacgccggcgtgcgt
atcgcgctggacgattttggcatgggctacgcggggctgcgccagctccagcacatgaaa
tccctgcccatcgacgtgctgaaaatcgacaaaatgtttgtcgatggcctgccggaagat
aacagcatggtctcggcgattatcctgctggcgcgcagtctgaatttgcagatggtggcg
gaaggcgtcgagaccgaagcgcagcgtgaatggctggcgcaggcgggggttgaaatcgct
cagggcttcctttatgcccgtgcggtacccgctgaaaccttcgaagaacgttatctgaag
cacaattga
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