Citrobacter sp. Y3: HAP28_02045
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Entry
HAP28_02045 CDS
T10856
Symbol
nirB
Name
(GenBank) NADPH-nitrite reductase large subunit
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy00910
Nitrogen metabolism
ciy01100
Metabolic pathways
ciy01120
Microbial metabolism in diverse environments
ciy01310
Nitrogen cycle
Module
ciy_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
HAP28_02045 (nirB)
Enzymes [BR:
ciy01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
HAP28_02045 (nirB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
NIR_SIR_ferr
Pyr_redox_3
Rubredoxin_C
GIDA
AlaDh_PNT_C
Lys_Orn_oxgnase
FAD_binding_3
NAD_binding_8
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QIO37905
LinkDB
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Position
complement(450960..453503)
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AA seq
847 aa
AA seq
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MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRKAYDRVHLSSYFSHHTAEE
LSLVREGFYEKHGVNVLVGERAITINRQEKVIHSSAGRTVYYDKLIMATGSYPWIPPIKG
SETQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGVETHVIEFAPML
MAEQLDPMGGEQLRRKIESMGVRVHTSKNTQEIVQQGTEARKTMRFADGSELEVDFIVFS
TGIRPRDKLATQCGLEVAPRGGIVINDACQTSDPDIYAIGECASWNNRVYGLVAPGYKMA
QVAVDHILNNENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEVYKRLI
VSQDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHAGSGKPSIGVDKLPD
SAQICSCFDVTKGMLVAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIE
VNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYI
LKPQHTPLQDTNDNFLANIQKDGAYSVIPRSAGGEITPEGLVAVGRIAREFNLYTKITGS
QRIGLFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGFGVE
LENRYKGIRTPHKMKFGVSGCTRECAEAQSKDVGIIATEKGWNLYVCGNGGMKPRHADLL
AADIDRETLLKYLDRFMMFYIRTADKLTRTAPWLDNLEGGIEYLRSVIIDDKLGLNEHLE
EEMARLREAVVCEWTETVNTPSAQTRFRHFINSDKRDPNVQVVPEREQHRPATPYERIPV
TLVEENA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtcagactcgctattatcggtaatggtatggtcggccatcgctttattgag
gaccttcttgataaatccgacgctgccaattttgatattactgttttctgcgaagaaccc
cgcaaggcatacgaccgtgtgcacctgtcatcctacttctcacaccacaccgccgaagaa
ctgtctctggttcgcgaaggattttacgagaagcacggcgttaacgtgctggtcggcgaa
cgtgcgattaccatcaaccgccaggaaaaagtgattcactccagtgcgggccgtacggtt
tactacgacaagctgattatggcgaccggttcttatccgtggatcccgccgattaaaggt
tccgaaacccaggactgcttcgtttatcgtaccattgaagacctcaacgcgattgaatcc
tgtgctcgtcgcagcaagcgtggtgcggtcgtcggcggcggtctgttaggtctggaagcg
gcaggcgcgctgaaaaacctcggcgtggaaactcacgtaattgaattcgccccgatgctg
atggctgagcagcttgaccctatgggcggcgaacagttgcgtcgcaagattgaaagcatg
ggcgtgcgcgtgcacaccagcaaaaacacccaggagatcgtccagcaaggcactgaagcc
cgtaaaacgatgcgttttgccgacggtagcgagctggaagtggacttcatcgtcttctcg
accggtattcgcccacgcgacaaactggcgacccagtgtggtctggaggttgcgccacgc
ggcgggatcgtgatcaacgatgcctgccagacgtccgacccggatatctacgccatcggt
gaatgtgccagttggaacaaccgggtatacggtctggtcgcgccgggctacaaaatggcg
caggtcgccgttgaccatattctcaataacgaaaacgccttcgaaggcgcagatttaagc
gccaagctgaaactgctgggcgttgacgtcggcggtattggcgacgcacatggccgcacg
ccgggtgcccgtagttacgtttacctcgacgaaagcaaagaagtctacaaacgccttatc
gtaagccaggataacaaaaccctgctcggcgctgtgctggtgggagataccagcgattac
ggcaacctgctgcaactggtactgaatgccatcgaactgccggaaaacccggactcgctg
atcctgccggcccatgccggcagtggtaaaccgtctattggcgtggataaactgccggac
agcgcgcagatttgctcctgtttcgacgtcaccaaggggatgctggtcgccgccatcaac
aaaggctgccacaccgttgccgcgctgaaagccgaaaccaaagccggtaccggctgcggc
ggctgtatcccactggttacccaggtgctgaacgccgaactggcgaaacagggtatcgaa
gtgaacaacaacctgtgcgagcactttgcttactcgcgccaggaactgttccacctgatt
cgagtggaaggcatcaaaaccttcgaggagctgctggcaaaacacggtaaaggttatggc
tgcgaagtgtgtaaaccgaccgtgggctctttgctggcttcctgctggaatgagtacatt
ctgaaaccgcagcacaccccgctgcaggatactaacgacaacttcctggcgaacatccag
aaagacggggcctactctgtgatcccacgctctgccggcggtgaaatcacgccggaaggt
ctggttgccgtaggtcgtatcgcccgtgaatttaatctgtacaccaaaatcaccggttct
cagcgtatcggcctgttcggcgcgcaaaaagacgacctgccggaaatctggcgccaactg
attgaagctggcttcgaaaccggccatgcctacgccaaagcgctgcgcatggcgaaaacc
tgtgtgggcagcacctggtgccgttatggcgtgggtgacagcgtgggcttcggcgttgag
ctggaaaaccgctacaaaggcattcgcaccccgcacaagatgaagttcggcgtttccggc
tgtacccgtgaatgtgccgaagcccagagcaaagacgtcggtatcatcgctaccgagaaa
ggctggaacctgtacgtctgcggtaatggcgggatgaaaccgcgtcatgcggatctgctg
gcagcggatatcgatcgtgaaacgctgctcaaatatctcgaccgtttcatgatgttctac
atccgtacggcggacaaactgacccgtaccgccccgtggttagacaacctggaaggcggc
attgagtatctgcgttccgtcatcatcgacgacaaactaggtctgaacgaacatctggaa
gaagagatggcccgtctgcgcgaagccgtagtctgcgagtggacggaaaccgtcaacacg
ccatctgcccagacgcgtttcagacactttatcaacagcgataaacgcgatccgaacgtc
caggtagtgcctgaacgtgaacagcatcgtccggccacgccgtatgaacgcatcccggtc
actctggtggaggaaaacgcatga
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