Citrobacter sp. Y3: HAP28_02980
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Entry
HAP28_02980 CDS
T10856
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ciy Citrobacter sp. Y3
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ciy03016
]
HAP28_02980 (truB)
Enzymes [BR:
ciy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HAP28_02980 (truB)
Transfer RNA biogenesis [BR:
ciy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HAP28_02980 (truB)
Prokaryotic type
HAP28_02980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QIO38074
LinkDB
All DBs
Position
618847..619791
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVAFTPEQLAAALDTFRGDIE
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLTVSKYPVDRMVTLERLREMVEQAEQQGIPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTNGAPQEGLVRVTEGDDGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgcgacattcacggtgtcctgctgctggataagccg
cagggcatgtccagcaatgacgtactgcaaaaagttaaacgcatttataacgccaatcgc
gccgggcataccggggcgctggatccgttagcgaccggcatgctgccgatttgcctcggg
gaagcgaccaagttttcgcagtatctgctggattctgacaagcgttatcgggtgattgcc
cgtctgggacagcgtacagacacgtccgatgccgatgggcaaatcgtacaggagcgcccg
gtcgccttcacccccgagcaactggcggccgcgctggacacgttccgcggtgatatcgag
caggtgccatcgatgtattcggcgctgaagtatcagggtaaaaaactgtacgaatacgcg
cgtcagggcattgaagtgccgcgtgaagcccgaccgattaccgtttacgagctgttgttt
atccgtcatgaaggggatgaactggagctggaagtgcactgttcgaaaggcacttatatt
cgtactattattgacgatctgggtgagaagctgggatgtggcgcgcatgtgatcttcctg
cgtcgtctgacggtcagcaaatatccggtggatcgtatggtcacgctggagcgtctgcgt
gaaatggtcgaacaggcggagcaacaggggatcccggcagcacagttgcttgatccgctg
ttgatgccgatggacagtccggcatcggactaccctgtcgttaatttgccgctaacatca
tcggtttacttcaaaaacggtaacccggttcgcacgaacggcgccccgcaggaagggtta
gtccgtgtcacggaaggtgatgacggtaaatttatcggtatgggcgagatcgacgacgaa
ggtcgcgtggcgcctcgccgattagtggtggagtatccggcgtag
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