KEGG   Citrobacter sp. Y3: HAP28_06045
Entry
HAP28_06045       CDS       T10856                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ciy  Citrobacter sp. Y3
Pathway
ciy03030  DNA replication
ciy03430  Mismatch repair
ciy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ciy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HAP28_06045 (dnaQ)
   03430 Mismatch repair
    HAP28_06045 (dnaQ)
   03440 Homologous recombination
    HAP28_06045 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ciy03032]
    HAP28_06045 (dnaQ)
   03400 DNA repair and recombination proteins [BR:ciy03400]
    HAP28_06045 (dnaQ)
Enzymes [BR:ciy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HAP28_06045 (dnaQ)
DNA replication proteins [BR:ciy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HAP28_06045 (dnaQ)
DNA repair and recombination proteins [BR:ciy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HAP28_06045 (dnaQ)
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 vATP-synt_AC39
Other DBs
NCBI-ProteinID: QIO38630
LinkDB
Position
1262072..1262800
AA seq 242 aa
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDP
EAFGVHGIADEFLLDKPTFAEVADEFLDYIRGAELVIHNASFDIGFMDYEFSKLNRDIPK
TNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDAQILADVYLMMTG
GQTTMAFSMEGETQQQGNTGILRLVRQASRLRVVFATDEEVAAHESRLDLVEKKGGSCLW
RA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagcactgcaattacgcgacagatcgtcctcgataccgaaaccaccggtatgaaccag
atcggcgcgcactacgaagggcacaagatcattgagatcggtgctgtagaggtggtgaac
cgccgtctgacggggaataacttccatgtctatctgaagcctgatcggctggtggatccg
gaagcgttcggtgtccacggtattgcggatgagttcctgctggacaagccgacatttgcc
gaagtggcggatgaatttctcgattatatccgcggggcggaactggtcattcataacgcg
tcgtttgatatcggctttatggattacgagttcagcaagcttaaccgcgatatcccgaaa
accaataccttctgtaaagtcaccgatagcctggcgctggcgaggaagatgttcccaggc
aagcgtaatagcctggatgcattgtgctcgcgttatgagatagacaacagcaagcgtacg
ctgcacggcgcattgctcgatgcccagattctggctgatgtttatctgatgatgaccggc
ggtcagacgacgatggcgttttcgatggaaggggaaacccagcagcagggcaatacgggg
atcctgcggcttgtacgtcaggccagcaggctacgcgtcgttttcgccaccgatgaggaa
gtggcggcccatgaatcgcgcctcgacctggtggaaaagaaagggggaagttgcctctgg
cgggcgtag

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