Citrobacter sp. Y3: HAP28_06470
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Entry
HAP28_06470 CDS
T10856
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy00470
D-Amino acid metabolism
ciy00550
Peptidoglycan biosynthesis
ciy01100
Metabolic pathways
ciy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HAP28_06470 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HAP28_06470 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HAP28_06470 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ciy01011
]
HAP28_06470 (ddlA)
Enzymes [BR:
ciy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HAP28_06470 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ciy01011
]
Precursor biosynthesis
Amino acid ligase
HAP28_06470 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
RimK
ATPgrasp_ST
GARS_A
NHase_alpha
Motif
Other DBs
NCBI-ProteinID:
QIO38705
LinkDB
All DBs
Position
complement(1371337..1372431)
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AA seq
364 aa
AA seq
DB search
MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFEVVLLGIDKQGQWHVSDASNYLLN
ANDPAHIALRPSATSLAQVPGRHEQQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGML
RVANLPFVGSDVLGSAACMDKDVTKRLLRDAGLTIAPFITLTRANRNTISFAEVEARLGL
PLFVKPANQGSSVGVSKVTSEAQYAQAVALAFEFDHKVVVEQGIKGREIECAVLGNDHPQ
ASTCGEIVLNSDFYAYDTKYIDDNGAKVVVPAAIDPHINDKIREIAIQAYQALGCAGMAR
VDVFLTADNEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALERHAADNAL
KTTM
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttgcgggtaggaatcgtatttggtggtaaatcagcggaacatgaagtgtca
ttgcaatcggcaaaaaatattgtcgatgccatcgacaagacccgctttgaggtcgtgctg
ttaggcattgataagcaagggcaatggcacgtcagcgatgccagcaattatctgctcaat
gccaacgatcctgcgcatattgcgctgcgtccttctgcgaccagccttgcgcaggttccg
ggtagacacgagcaacagttgattgatgcgcagaatggtcagccgctgccgaccgtagac
gtgattttcccgattgttcacggcacgctgggtgaagatggttcactgcagggaatgctg
cgcgtggcaaatctgcccttcgtgggttccgacgtgctgggttcagccgcgtgcatggat
aaagacgtcaccaaacgcttgttgcgtgatgccggactgactatcgcgccgtttattacg
ctgacgcgagccaaccgtaacacgataagctttgccgaggtagaagcccgtcttggcctg
ccgctgttcgttaagcccgccaatcagggatcgtctgtcggcgttagcaaagtcaccagc
gaagcgcagtacgcgcaggcggtcgccctcgccttcgaattcgatcacaaagtggtggtg
gagcaagggatcaaggggcgcgagatcgagtgcgcagtgctgggcaacgatcatccgcag
gccagcacctgtggcgagatcgtgctcaacagtgatttctatgcctacgacaccaaatac
attgacgataacggcgcgaaagtggtggttcctgcggcgattgatccgcacatcaacgac
aaaatccgcgagatcgccattcaggcgtatcaggcgctgggctgcgctggcatggcacgc
gtcgatgtctttttaaccgccgacaatgaggtggtgatcaatgagatcaacaccctacca
ggctttaccaacatcagcatgtatccgaaactctggcaggccagtggcttaggttacacc
gacttgatcacccgtttgatcgaactggcgctggaacgccatgctgcagataacgcgctg
aaaacgacgatgtaa
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