Citrobacter sp. Y3: HAP28_07025
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Entry
HAP28_07025 CDS
T10856
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy03030
DNA replication
ciy03430
Mismatch repair
ciy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HAP28_07025 (dnaX)
03430 Mismatch repair
HAP28_07025 (dnaX)
03440 Homologous recombination
HAP28_07025 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ciy03032
]
HAP28_07025 (dnaX)
03400 DNA repair and recombination proteins [BR:
ciy03400
]
HAP28_07025 (dnaX)
Enzymes [BR:
ciy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HAP28_07025 (dnaX)
DNA replication proteins [BR:
ciy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HAP28_07025 (dnaX)
DNA repair and recombination proteins [BR:
ciy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HAP28_07025 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
ResIII
AAA_16
AAA_2
AAA_14
AAA_7
PIF1
AAA_assoc_2
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
QIO38812
LinkDB
All DBs
Position
1486770..1488698
Genome browser
AA seq
642 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPSHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
DQIRHQLEHILNEEQIAHEPRALQLLSRAADGSLRDALSLTDQAIASGDGQVSTQAVSAM
LGTLDDDQALSLVEAVIAADGERVMTLVNEAAARGIEWEALLVEMLGLLHRIALVQLSPA
ALGGDMATIEVRMRELARTVPPADVQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPQQSAPAQPAPAAPLPESTSQVLAARNQLQR
AQGATKAKKSEPAAAPRARPVNNAALERLASVSERVQARPAPSALEQAPAKKEAYRWKAT
TPVAEVKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVAL
NAWKEENDNAVCLHLRSSQRHLNSSGAQQKLAEALSQLAGSTVELTIVEDDNPAVRTPLE
WRQAIYEEKLAQARESIVADNNIQTLRRFFDADLDEESIRPI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttttagcccgaaaatggcgcccacaaacctttgctgacgtcgtcggc
caggaacatgtgctgaccgcactggcgaacggcttgtcgttagggcgtattcaccatgca
tatcttttttccggtacccggggtgtcggtaaaacctccattgcccgtctgctggcaaag
ggactgaattgcgaaaccggcattaccgccacgccgtgcggcgtgtgtgataactgccgt
gaaatcgaacaggggcgatttgtcgatctgattgagatcgatgctgcctcgcgcactaaa
gttgaagacacccgggatctgctggataacgtccagtacgccccggcgcgcggtcgattc
aaagtttatctgatcgacgaagtgcatatgctgtctcgccacagttttaacgcgctgctc
aaaacgcttgaagagccgccgtcgcacgtcaaattcctgctggcgacaaccgatccgcag
aagctgccggtgactattctgtcccgctgcctgcagttccatcttaaggcgctggatgtc
gaccagatccgccatcagcttgaacacattcttaacgaagagcagatagcccacgagccg
cgcgcactgcaactgctttcccgtgcggccgatggcagtttgcgtgacgcgctgagtctg
accgatcaggcgatagccagcggtgatggccaggtttccacccaggcggtgagcgcgatg
ctcggcacgctggatgacgatcaggcgctgtcgctggtggaggcggtaatcgctgccgac
ggtgaacgggtgatgacgctggtcaacgaggccgcagcgcggggaattgagtgggaagca
ctgctggtcgaaatgcttggtctgctgcaccgtattgcgctggtccagttgtctcctgcc
gcactcggcggcgacatggcgacgatcgaagtgcgcatgcgtgaactggcgcgcaccgtg
ccgccggcggacgttcagctttattaccagacgttgttgattggccgtaaagaactgccg
tacgcgccagacagacgcatgggcgttgaaatgaccttactgcgggcgctggcgtttcat
ccgcgtatgccgctaccagaacccgaggttccgcgacaatcatttgcccctgtcgcgcca
acggcggtaatgacgccgacccaggtgccgcagcagtctgcacccgcgcaaccggccccg
gcagcaccgttaccggaatccaccagtcaggtgctggcggcgcgcaaccaactgcaacgt
gcgcagggagcaaccaaagcaaaaaagagtgaaccggcagccgcaccccgcgcgcggccg
gtgaataacgctgcgctggaaagactggcttcggtatcagaacgcgtacaggctcgtcct
gcaccgtctgcgctcgagcaggcgccggcgaagaaagaggcctatcgctggaaggcgacc
acgccggttgctgaagtgaaagaggtggtggcgacaccaaaggcgctgaaaaaagcgctg
gagcatgagaaaacaccggaactggcagctaagcttgccgcagaagcgattgaacgcgat
ccgtgggcggcgcaggtcagccagctttcgctgccaaaactggttgagcaggtcgcgctc
aacgcctggaaagaagagaacgataatgcggtctgtctgcatttgcgttccagccagcgt
cacctgaattccagcggtgcgcagcaaaagctggcggaagcactgagtcagcttgcggga
tcaacggttgaactgaccatcgtagaagatgataatccggcggtgcgaacgccgctggag
tggcgtcaggcgatttatgaagagaaacttgcgcaggcgcgtgagtcgatagttgcggat
aacaacatccagaccctgcgtcggttcttcgatgcggatctggatgaagaaagtatccgc
cccatttga
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