Citrobacter sp. Y3: HAP28_08530
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Entry
HAP28_08530 CDS
T10856
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ciy Citrobacter sp. Y3
Pathway
ciy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HAP28_08530 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciy03400
]
HAP28_08530 (uvrB)
DNA repair and recombination proteins [BR:
ciy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HAP28_08530 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HAP28_08530 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
IF2_N
AAA_22
PRDA1_C
Motif
Other DBs
NCBI-ProteinID:
QIO39077
LinkDB
All DBs
Position
1822392..1824413
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTISR
YTIYPKTHYVTPRERIVQAMEEIKVELAERRKILLANDKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGEVVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRKRAEINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITASMAKAIGETERRREKQQQYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRSAAQSDVVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcatttaaaccttccggcgatcagcctgaggcg
atacgccgtctggaagagggactggaggacggcctggcgcatcagacgctacttggcgta
acggggtcggggaaaacgttcaccattgcgaatgtgatcgcggatttgcagcgaccgacg
atggtgctggcacccaacaaaacgctggcggcgcagctgtatggtgaaatgaaagagttt
ttcccggataacgccgtcgagtatttcgtctcctactacgactactatcagccggaagcg
tatgttcccagctcagacaccttcatcgaaaaagatgcctcggtgaatgaacacatcgag
cagatgcgtctgtcggccaccaaagcgttgctggagcgtcgtgacgtgatcgtcgtggcc
tccgtttctgccatctatggtctgggcgatcccgatttatatctgaagatgatgctgcac
ctgacggtgggcatgattatcgatcagcgcgccattctgcggcgactggctgaactgcaa
tatacccgtaacgatcaggcgttccagcgcgggactttccgcgtgcgcggtgaggtgatt
gacatcttcccggcggagtctgacgacatcgcgctgcgtgtggagctgtttgatgaagag
gtggagcgtctgtcgctgtttgacccgctgaccgggcaggtggaatccactatttcgcgc
tacaccatctaccccaaaacgcactacgtgaccccccgtgagcgcattgtgcaggcgatg
gaagagatcaaagtcgaactggctgaacgtcgcaaaatcctgctcgccaacgacaaactg
ctggaagagcaacgcctgagtcagcgtacccagtttgatctggaaatgatgaacgagctg
ggttactgctcggggatcgaaaactactcgcgctttctgtcaggacgcgggccgggtgag
ccgccgccgaccctgtttgactatctgcccgctgacggtttgctggtggtggatgaatcc
cacgtcaccatcccgcagattggcgggatgtatcgtggcgatcgggcgcgtaaagagacg
ctggtggagtacggtttccgtttgccatcggcgctggataaccgtccgttaaagttcgaa
gagtttgaagcgctggctccgcagaccatatatgtgtctgcgacgccgggcaattacgag
ctggagaaatcgggcggagaagtggttgatcaagtggtgcgtccgacagggttgctggat
ccggtcattgaagtgcgaccggtggcaacgcaggtggacgatctgctctctgaaatccgc
aagcgcgcagagatcaacgagcgcgtgctggttaccacgctcaccaagcgtatggcggaa
gatctcaccgagtatctggaagaacacggtgagcgggtgcgttacctgcactcggacatc
gataccgttgagcgtatggagatcattcgtgatctgcgtctgggcgagtttgatgtgctg
gtggggatcaacctgttgcgcgaaggtctcgatatgcctgaggtgtcgctggtggcgatt
ctcgacgccgacaaggaagggttcctgcgttccgaacgttcgctgatacagaccatcggt
cgtgcggcgcgtaacatcaacgggaaggcgattctttacggtgacaaaattacggcctca
atggcgaaggcgattggcgaaaccgagcgtcgtcgcgagaaacagcagcagtacaatgaa
gaacacggcattactccgcagggcctgaataaaaaagtggtcgatattctggcgctgggg
cagaacattgcgaaaaccaaagcgaagggccgaggcaaatcgcgttccgcagcgcaatcg
gatgtggtggaactggacatgacgccaaaagcgttgcaacagaagattcacgagctcgaa
gggcagatgatgcagcatgcgcagaacctggaattcgaagaggccgcgcagatccgcgat
caactgcatcagctgcgtgaactgtttattgctgcgtcgtga
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