Citrobacter sp. Y3: HAP28_12425
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Entry
HAP28_12425 CDS
T10856
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy00362
Benzoate degradation
ciy01100
Metabolic pathways
ciy01120
Microbial metabolism in diverse environments
ciy01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HAP28_12425 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
HAP28_12425 (pcaH)
Enzymes [BR:
ciy01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
HAP28_12425 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
QIO39785
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All DBs
Position
2628457..2629197
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AA seq
246 aa
AA seq
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MREKVSSREVIHRDYNSHPPAFAPGYKTSVLRSPRNALISLQNSLSEITGPVFSDNDLGP
LDNDLIMNYAKDGLPIGERIIVHGYVRDGFGRPMRNTLVEVWQANAGGRYRHKKDQYLAP
IDPNFGGCGRVLTDENGYYFFRTIKPGPYPWRNQVSDWRPSHIHFSLSGEAFAQRLITQM
YFEGDPLIKQCPIVKTINNDDAIRTLIAELDTHAAVPLDCLAYRFDLVLRGQRATLFENR
TQGGAQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaaaagtgtcctctcgcgaggtgatccatcgcgactataacagccatccgccc
gccttcgcccccggctataagaccagcgttctgcgctcgccgcgcaacgcgctgatctct
ttgcagaattcattgtctgaaatcaccgggccggtattcagcgacaacgatcttggcccg
ctggataacgacctgattatgaattacgccaaagacggcctgccgattggcgaacggatt
atcgtccacggttacgtgcgcgacggttttggccgcccaatgagaaatacgctggtcgaa
gtctggcaggccaatgccggtggtcgctatcgtcataaaaaagaccagtatctcgcgccg
attgatcctaattttggcggctgcggacgggtattaaccgatgagaacggctattacttt
ttccgtaccatcaaacccggcccttatccgtggcgcaatcaggtcagtgactggcgtccc
tcgcatattcacttttcactctccggcgaggcctttgcccaacggttgattacgcaaatg
tattttgaaggcgacccgttgatcaaacagtgcccaattgtgaaaactatcaataacgat
gatgcgatccgcacattgattgccgaactggatacccacgccgccgtaccgctcgactgc
ctggcatatcgttttgacctcgtacttcgcggacagcgcgctacgttgtttgaaaaccgc
actcagggaggcgcgcaatga
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