Citrobacter sp. Y3: HAP28_14910
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Entry
HAP28_14910 CDS
T10856
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy00061
Fatty acid biosynthesis
ciy00071
Fatty acid degradation
ciy01100
Metabolic pathways
ciy01212
Fatty acid metabolism
ciy02024
Quorum sensing
ciy04146
Peroxisome
Module
ciy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HAP28_14910 (fadD)
00071 Fatty acid degradation
HAP28_14910 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HAP28_14910 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HAP28_14910 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ciy01004
]
HAP28_14910 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ciy04147
]
HAP28_14910 (fadD)
Enzymes [BR:
ciy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HAP28_14910 (fadD)
Lipid biosynthesis proteins [BR:
ciy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HAP28_14910 (fadD)
Exosome [BR:
ciy04147
]
Exosomal proteins
Exosomal proteins of breast milk
HAP28_14910 (fadD)
Exosomal proteins of breast cancer cells
HAP28_14910 (fadD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QIO40217
LinkDB
All DBs
Position
complement(3087879..3089564)
Genome browser
AA seq
561 aa
AA seq
DB search
MKKVWLNRYPADVPAEINPDRYQSLVELFEHAVARYADQPAFMNMGEVMTFRKLEERSRA
FSAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GAAAIVIVSNFAHTLEKVVDKTSVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL
PDAISFRSALHAGYRMQYVKPEVVSEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKA
TYGPLLHPGKELVVTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAMTGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQAVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVSPDQPGELCVKGPQVMLGYWQ
RPDATDEIIKDGWLHTGDIAVMDDEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
LEVAAVGVPSGSSGEAVKIFVVKKEASLTEEALVTFCRRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARAKVDNKG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaggtttggttaaaccgttaccccgcagatgtgcctgcggagatcaatcctgac
cgttatcaatccctggtggaactgtttgaacatgctgtcgcgcgttatgccgatcagccc
gcgtttatgaacatgggggaggtaatgaccttccgcaagctggaggagcgtagccgcgcc
ttctcagcttacctgcaacaggggctgggactgaaaaagggcgatcgcgtcgcgctgatg
atgccaaacctgctgcaatatccggtggcgctgtttggcattttgcgtgccgggatgatt
gtggtgaacgtcaacccgctttataccccgcgtgaactggagcatcagttaaacgacagc
ggcgcggcggcgattgtgattgtctccaacttcgcccataccctggaaaaagtggttgat
aaaaccagcgttaagcacgtcattctgacccgtatgggcgaccagctttccacggctaaa
ggcacgctggtgaacttcgtagtgaagtacatcaaacgactggtgccgaaatatcatctg
ccggatgcgatctcttttcgcagtgcgctgcacgccgggtaccgtatgcagtatgttaaa
ccggaagtggtttctgaggacctggcgtttttacagtacaccggcggaacgaccggagtg
gcgaaaggggcgatgctgacgcatcgcaatatgctggctaacctggagcaggtgaaagcc
acttacggaccgcttttgcatccgggtaaagaactggtggtgaccgcgttgccgctgtac
cacatttttgccctgaccatgaactgcctgctgtttatcgagctgggagggcagaacctg
ctgatcaccaacccgcgcgacattccggggctggttaaagagctggcgaagtatccgttt
accgcgatgaccggcgtgaacactttgtttaacgccttgctgaacaataaagagttccag
caactggatttctcttcgttgcatctttctgcgggcggcggcatgccagtgcaacaggcg
gtggcagaacgctgggtaaaactgacaggacagtatctgcttgaagggtatggcctgacc
gaatgcgcgccgctggtcagcgttaacccgcacgatattgattatcacagcggcagcatc
ggcctgccagtgccatcgaccgaagccaaactggtggacgatgacgacaacgaagtgtcg
ccggatcagccgggtgaactgtgcgtgaaagggccgcaggtgatgctgggctactggcag
cgtccggacgcgaccgatgaaatcatcaaagacggctggctacacaccggtgatatcgca
gtcatggacgatgaaggcttcctgcgcattgtcgatcgtaagaaagatatgattctggtc
tccggctttaacgtttatccgaacgagatcgaagatgtggtgatgcagcatccgggcgtg
ctggaagtggctgccgtcggtgttccgtccggcagcagcggcgaagcggtgaagattttt
gtggtgaaaaaagaggcttcactcaccgaagaggcgctggtcactttctgccgccgtcag
ctcacgggctataaagtcccgaaactggttgaattccgcgatgaactgccgaaatcaaac
gtcggcaaaattttacgtcgagaattacgtgacgaagcccgtgccaaagtggacaataag
ggctga
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