Citrobacter sp. Y3: HAP28_16045
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Entry
HAP28_16045 CDS
T10856
Symbol
dacD
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy00550
Peptidoglycan biosynthesis
ciy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HAP28_16045 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ciy01002
]
HAP28_16045 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ciy01011
]
HAP28_16045 (dacD)
Enzymes [BR:
ciy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HAP28_16045 (dacD)
Peptidases and inhibitors [BR:
ciy01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
HAP28_16045 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ciy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HAP28_16045 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
QIO40417
LinkDB
All DBs
Position
complement(3298781..3299953)
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AA seq
390 aa
AA seq
DB search
MLLKPRLFITASLLAMHLSSALAAGTADFAPPPPGIEAGSWVLMDYTTGQILTAGNEHQQ
RNPASLTKLMTGYVVDRAIDSQRITPDDIVTVGRDAWAKDNPVFAGSSLMFLKEGDRVSV
RDLSRGLIVDSGNDACVALADYIAGGQPQFVAMMNNYVKKLNLRDTHFETVHGLDAPGQH
SSAYDLAVLSRAIIHGEPTFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSG
AGFNLIASAVDGQRRLIAVVMGANSPKGREEQARKLLHWGQQNFDTVQILRRGKQVGTER
IWYGDKEKIALGTEHDFWMALPKAEIPHIKAKYILDKKELEAPLAAHQRVGEIELYDRDK
LVAHWPLVTLEAVGKGGVFSRLSDYFHHKV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgaaaccccgtctgtttattaccgcttctttactcgcgatgcatctctcttct
gcacttgctgccggtacggctgactttgcgccaccgccacctggcattgaagccggttca
tgggtgcttatggattacaccacggggcaaattctcacggcgggtaatgaacatcaacag
cgcaatcctgccagcctgaccaagctgatgaccggttacgtggttgaccgcgccattgac
agccagcgcattaccccggacgacattgtcaccgtgggacgcgacgcgtgggcgaaggac
aacccggtgttcgccggatcctcattgatgttcctcaaagaaggggaccgggtgtccgtg
cgcgatttaagccgtgggttgattgttgattccggtaacgacgcctgcgtagcgctggca
gattacatcgctggtgggcaaccgcagtttgtcgcgatgatgaacaattacgtcaagaag
ctcaatttgcgggacacccattttgagacggtgcacggactggatgcccctggtcagcac
agttcagcttacgatctggcggtgttgtcccgggcaatcattcatggtgagccgacgttt
tatcacatgtacagtgagaaaagcctcacctggaacggtattacccagcaaaaccgtaac
ggactgctgtgggataaaaccatgaacgttgatggcctgaaaaccgggcacacctcaggc
gcggggttcaatttgattgcttctgcggtggacggtcagcgccgactgattgccgtggtg
atgggcgcgaatagcccaaaagggcgtgaggagcaggcacgtaaactgctgcactgggga
caacaaaatttcgacacggtgcagatcctgcgtagaggtaagcaggtcggaacggagcgt
atctggtacggtgataaagagaaaatcgcgttaggtaccgaacacgatttctggatggcg
ctgccaaaggcggaaatcccgcacatcaaagcgaagtacatcctggataagaaggaactg
gaagcgccgcttgccgcccatcaacgggtcggggaaatcgaactctacgaccgcgacaaa
ctggtcgctcactggcctctggtcacgctggaagccgtcggtaagggaggcgtcttctcc
cgtctgagtgattatttccaccacaaagtctga
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