Citrobacter sp. Y3: HAP28_16345
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Entry
HAP28_16345 CDS
T10856
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HAP28_16345 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciy03400
]
HAP28_16345 (alkA)
Enzymes [BR:
ciy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HAP28_16345 (alkA)
DNA repair and recombination proteins [BR:
ciy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HAP28_16345 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QIO42276
LinkDB
All DBs
Position
complement(3366661..3367530)
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AA seq
289 aa
AA seq
DB search
MFTLNWQPPYDWSWILGFLAARAVDGVETVEALRYTRSLAIGQHKGIIAAVPDTATNTLQ
VTLSEGLLPVADICLEKMERLFDLRCKPQQISHALGELGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTSKVARWYGDVLADSPEYVCFPTPEQLAAADPLELKALGMPLMRAN
ALIYLAQAARDGILVTQPPEDIEQGIKMLQGFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPSVDREITGVE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgaactggcaaccgccttatgactggtcatggattctgggtttccttgcc
gcccgtgcggtcgacggggtggaaaccgtcgaggcgttacgctacacgcgaagcctggcg
ataggacaacataagggaatcatcgccgccgttcccgacaccgcgacgaacacgcttcag
gtaacgctgagtgaagggctgttgccggtcgcggatatctgccttgaaaaaatggagcga
ctgtttgatttgcgctgtaaaccacagcagatcagccatgcgttaggtgaactgggcgca
gcgcgtccgggactgcgcctgcccggttcggtggacgcctttgagcagggcgtccgggcg
attctgggccaactggtgagcgtggcgatggcggcaaagctgacgtcgaaggttgcacga
tggtatggcgacgtgttagcggacagcccggagtacgtctgtttcccaacgcctgaacag
ctagccgcagccgatccgctggaactgaaagcgttgggcatgccgctgatgcgcgccaac
gcgcttatctatctggcgcaggccgcccgggatggaatactggtaacccagccgccggaa
gatattgaacagggaatcaaaatgctacagggatttccggggattggtcgctggacggca
aactattttgccctgcgcggctggcaggcgaaggacgtgtttttgcctgacgactatctg
atcaaacaacgtttcccggggatgactcccgcgcagatccgtcgctatgcggagcgctgg
aaaccctggcgctcctacgcgttattgcacatctggtataccgagggatggcagccgtca
gttgatcgcgaaataactggtgttgagtag
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