Citrobacter sp. Y3: HAP28_17020
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Entry
HAP28_17020 CDS
T10856
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ciy Citrobacter sp. Y3
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ciy03032
]
HAP28_17020 (gyrA)
03400 DNA repair and recombination proteins [BR:
ciy03400
]
HAP28_17020 (gyrA)
Enzymes [BR:
ciy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HAP28_17020 (gyrA)
DNA replication proteins [BR:
ciy03032
]
Prokaryotic type
DNA Topoisomerases
HAP28_17020 (gyrA)
DNA repair and recombination proteins [BR:
ciy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HAP28_17020 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
QIO40597
LinkDB
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Position
complement(3518081..3520717)
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AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDNEDISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPSEAKAALIARPWDLGNV
AAMLERAGDDAARPEWLEPEFGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSADRLMEVIREELELIRDQFGDERRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGVNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAVRAMGRTATG
VRGIKLAGEDKVVSLIIPRGEGAILTVTQNGYGKRTAAEEYPTKSRATQGVISIKVTERN
GSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGSAAEGDDDIAPEAETDDDVADDADE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggtcaacattgaggaagagctgaagaactct
tatctggattatgcgatgtcggtcattgttggccgtgcgctgccggatgtccgagatggc
ctgaagccggtacaccgtcgcgtactttacgccatgaacgtattgggcaatgactggaac
aaagcctataagaaatcagcccgtgtcgttggtgacgtaatcggtaaataccacccgcat
ggcgactctgcggtatacgacaccattgtccgtatggctcagccgttctcgctgcgatat
atgctggtggatggccaggggaacttcggttccatcgatggcgattccgcggcggcgatg
cgttatacggaaatccgtctggcgaagattgcccatgagttaatggccgatctggaaaaa
gagacggttgattttgtcgacaactatgacggcacggaaaaaatccctgacgttatgccg
accaaaatcccgaacctgttggtaaacggttcgtccggtatcgcagtagggatggcgacc
aacatcccgccacacaacctgacggaagtggttaacggctgccttgcgtatatcgacaat
gaagacatcagcattgaagggctgatggaatacatcccgggtccggacttcccgacggcg
gcgatcatcaacggtcgtcgcggtattgaagaagcctatcgtaccggtcgcggtaaagtg
tacatccgtgcccgcgcggaagtggaagtagacgcgaaaaccggtcgtgaaaccattatc
gtgcatgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaaaatcgcggaactg
gtaaaagacaaacgcgttgaaggcatcagcgcgctgcgtgacgagtctgacaaagacggt
atgcgcatcgtgattgaagttaagcgcgacgcggtcggggaagtggtactgaacaacctc
tactcccagactcaactgcaggtctctttcggtatcaacatggtggcactgcaccatggt
cagccgaagatcatgaacctgaaagacatcatttcagcgtttgtgcgccaccgccgtgaa
gtggtgacccgccgtaccattttcgaactgcgtaaagcccgcgatcgtgcgcatatcctt
gaagcactggcgattgcgctggcgaacatcgacccgatcattgagctgattcgtcgtgcg
ccgaccccgtcggaagcgaaagccgcattgatcgcacgtccgtgggatctgggcaacgtg
gctgcgatgctggaacgtgctggtgacgacgctgcgcgtccggaatggctggagccagaa
ttcggcgtgcgtgacggtcagtactacctgacagaacagcaggcccaggcgattctggat
ctgcgtttgcagaaactgaccggccttgagcatgaaaaactgctcgatgaatacaaagag
ctgctggaacagatcgcggaactgctgcacattctgggcagcgccgatcgcctgatggaa
gtgattcgcgaagagctggagctgatccgcgatcagtttggcgatgagcgtcgtaccgaa
atcaccgcgaatagcgctgatatcaatatcgaagatctgatcaaccaggaagatgtagtt
gtgaccctgtctcaccagggctacgtgaagtatcagccgctgaccgactacgaagcacaa
cgtcgtggtgggaaaggcaaatcggctgcacgtattaaagaagaagactttattgaccgt
ctgctggtggccaacacccatgacacgatcctctgcttctccagccggggtcgtctgtac
tggatgaaggtttatcaactgccagaagcgagccgtggtgcgcgtggccgtccgatcgtc
aacctgctgccgctggaagccgacgaacgtattaccgctatcctgccggttcgtgagtac
gaagagggcgtgaacgtctttatggcgactgccagcggtacggtgaagaaaaccgcgctg
accgaattcagccgcccgcgttctgccggtatcattgcggtgaacctgaacgatggcgac
gaactgattggtgtggatctgacctccggttctgacgaagtcatgctgttctcggcggcg
ggcaaagtggtgcgctttaaagaggacgccgtccgtgcgatgggccgtactgcgactggc
gtacgaggcatcaagctggcgggcgaagacaaagtcgtctccctgattattccacgtggt
gaaggcgcgatcctgaccgtgacgcaaaatggttacggtaagcgtacggcggcggaagag
tatccgaccaagtcccgtgcgacgcagggcgttatctctatcaaagtgaccgagcgcaac
ggttctgttgttggcgcggtgcaggttgatgattgcgaccagatcatgatgatcaccgat
gccggtacgctggtgcgtactcgcgtgtcggaaatcagcgtggtaggacgtaatactcag
ggcgtgatcctcatccgtacggcggaagatgaaaacgtggtgggtctgcagcgtgtggct
gagccggtggatgacgaagaactcgactccatcgacggtagcgcggcggaaggggatgat
gatatcgccccggaagcggaaaccgacgacgatgtcgccgatgacgctgacgagtaa
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