Citrobacter sp. Y3: HAP28_19700
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Entry
HAP28_19700 CDS
T10856
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy00250
Alanine, aspartate and glutamate metabolism
ciy00310
Lysine degradation
ciy00350
Tyrosine metabolism
ciy00650
Butanoate metabolism
ciy00760
Nicotinate and nicotinamide metabolism
ciy01100
Metabolic pathways
ciy01120
Microbial metabolism in diverse environments
Module
ciy_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HAP28_19700 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HAP28_19700 (gabD)
00310 Lysine degradation
HAP28_19700 (gabD)
00350 Tyrosine metabolism
HAP28_19700 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HAP28_19700 (gabD)
Enzymes [BR:
ciy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HAP28_19700 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HAP28_19700 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HAP28_19700 (gabD)
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Motif
Pfam:
Aldedh
DUF4371
Motif
Other DBs
NCBI-ProteinID:
QIO41078
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Position
4052165..4053616
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AA seq
483 aa
AA seq
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MQLNDPTLFRQQALIDGQWRDADSGEVIAVTNPANGKTLGSVPKMGSAETRDAIEAANRA
LPAWRDLTAKERANILRRWFNLMLEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELANRAGIPPGVFSVVTGSAGAVGNELTHNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDACLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYERFAEKLQQAVEKLHLGDGLAPDVTTGPLIDEKAVAKVQEHIADALEKGARIITGGKP
HALGGNFFQPTILVDVPDNAKVAKEETFGPLAPLFRFSDEADVIRQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCI
GLS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaaacgatccgacgttgttccgtcagcaggccttgatcgacggccagtggcgc
gatgccgatagcggcgaagtcattgcggtgaccaacccggccaacggcaagacgctgggc
agcgtgccaaaaatgggcagcgcggaaacccgcgacgccattgaggccgctaaccgcgca
ctgcccgcctggcgcgacctcaccgccaaagagcgggcgaatattctgcgtcgctggttc
aatctgatgctggagcatcaggacgatctcgcccgcctgatgaccctggaacagggcaag
ccgctggcagaagccaaaggggaaatcagctatgccgcctcctttattgagtggtttgcc
gaagagggcaaacgcatttatggcgacaccattcccggacaccaggccgacaaacgcctg
atcgtcattaagcaaccgattggcgttactgccgccattacgccgtggaacttcccgtca
gcgatgatcacccgcaaagccggtccggcactggcggctggctgcacgatggtgcttaaa
cccgccagccagacgccgttctccgcgctggcgctggcggaactggcaaaccgcgccggg
atcccgccgggcgtattcagtgttgtcaccggttcggcgggcgcggtcggtaacgaactg
acccacaatccgctggtgcgcaaactgtcgttcaccggttcgacggagatcggtcgtcag
ttgatggaacagtgcgccaaagacatcaaaaaagtctctctggagttgggcggtaatgcg
ccgtttatcgtctttgacgatgcctgcctcgataaagcggttgaaggcgcgctggcgtcc
aagttccgcaacgccggacagacctgcgtctgcgccaaccgtctgtatgtgcaggacggc
gtttatgagcgctttgcggagaagctgcaacaggcggtggaaaaactgcatctcggtgac
ggtctggcacccgacgtcactaccggcccactgattgatgagaaagcggtcgccaaagtg
caggagcatattgccgatgcgctggaaaaaggggcgcgcatcatcaccggcggaaaaccg
cacgcgctgggcggtaatttcttccagcccaccattctggtggacgtgccagacaacgca
aaggtcgccaaagaagagaccttcggtccattggctccgctgttccgctttagtgatgaa
gccgacgttatcagacaggccaacgacaccgagtttggtctggcggcctatttctacgcc
cgcgatttgagccgcgtctttcgcgttggcgaggcgctggagtacggcatcgtcggcatt
aataccggcattatctcgaacgaagtcgcgccgtttggcggaatcaaagcctccggtctt
ggccgtgaaggttccaaatacggcatcgaagattacttagaaatcaaatacctgtgcatt
ggcctttcataa
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