Citrobacter sp. Y3: HAP28_21725
Help
Entry
HAP28_21725 CDS
T10856
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
ciy Citrobacter sp. Y3
Pathway
ciy02010
ABC transporters
ciy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HAP28_21725 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HAP28_21725 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ciy02000
]
HAP28_21725 (lsrB)
Transporters [BR:
ciy02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
HAP28_21725 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
QIO41449
LinkDB
All DBs
Position
4481436..4482458
Genome browser
AA seq
340 aa
AA seq
DB search
MTIQSIKKIAVISTLSLAAFTLNAYAAERIAFIPKLVGVGFFTSGGNGALEAGKELGVDV
TYDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKVLTWDSDTK
PECRSYYINQGTPAQLGGMLVDMAANQVKKEKAKVAFFYSSPTVTDQNQWVKEAKDKIAK
DHPGWEVVTTQFGYNDATKSLQTAEGIIKAYADLDAIIAPDANALPAAAQAAENLKNTSV
AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADELLKKGDMNTGDKLDIPGVG
QVEVSPNSVQGYSYEAKGNGIVLLPERVVFTKENIDKYDF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgactattcagagcattaaaaaaattgccgtaatcagtacccttagcctggcggcgttc
actctcaacgcttatgccgcagagcgaatcgcgtttatcccaaaactggttggcgtggga
ttctttaccagcggcggtaacggcgccctcgaggcaggcaaagagctgggcgtcgatgtc
acctacgatggcccgacggagcccagcgtgtccggccaggttcagctcatcaataacttc
gtcaaccaggggtataacgccattgtggtgtccgccgtgtcgcctgatggcttatgcccg
gcgttaaagcgtgccatgcagcgcggcgtgaaggtgctgacctgggattctgacaccaaa
ccggaatgccggtcgtactacatcaaccagggcactcctgcccagttaggcggcatgctg
gtcgatatggccgcaaatcaggtcaaaaaagagaaagccaaagtggccttcttctactcc
agtccgaccgtgaccgatcaaaaccagtgggtaaaagaagcgaaagacaagatcgccaaa
gatcatccgggctgggaagtcgtcaccacgcagtttggttataacgacgccaccaaatcg
ctgcaaaccgcagaaggcattattaaggcttatgccgatctcgacgccatcatcgcgccg
gatgccaacgcccttcccgccgccgctcaggctgctgaaaacctgaaaaacaccagcgtg
gcgattgtcggcttcagcacgccaaacgtgatgcgcccttatgttgagcgcggcacggtg
aaagagtttggcctctgggacgtggtccagcagggcaagatctccgtgtacgtggctgac
gagctgctgaaaaaaggcgacatgaataccggcgacaagctggacattccgggcgtgggc
caggttgaagtctcgccgaacagcgtacagggctacagctatgaggcgaaaggcaacggc
attgtgctgctgcctgagcgcgtggtgttcaccaaagagaatatcgataagtacgatttt
tga
DBGET
integrated database retrieval system
