KEGG   Citrobacter sp. Y3: HAP28_21835
Entry
HAP28_21835       CDS       T10856                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ciy  Citrobacter sp. Y3
Brite
KEGG Orthology (KO) [BR:ciy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ciy02048]
    HAP28_21835
Enzymes [BR:ciy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HAP28_21835
Prokaryotic defense system [BR:ciy02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HAP28_21835
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N DUF4145 Helicase_C HSDR_N_2 SNF2-rel_dom DUF5614
Other DBs
NCBI-ProteinID: QIO41470
LinkDB
Position
4498620..4502033
AA seq 1137 aa
MEQSLNFEMLRSQWPELAELACMAERYVHSDPESCLVKLRNYTELMVRWLYRQERLPEGI
KANLYDLMNADVFTSMMPEAIIMKMDALRIHGNRAAHGGRIKAKDTYWLLKEAYLLGIWL
YVRYAHGNVDDCPKFSLPPLTQSSGRADDKRLEDAIRAQDESRERELALQRALQQEQEKA
EHLTQRLNEARSRNQHVADILSIDEAETRRRLIDSRLLAADWNVGEELRNTDQVTQEHPV
KEQPTATGDGYADYVLWDEAHKPLAVVEAKKTSINAEQGRIQARLYADWLEKEYGQRPVI
FYTNGYDIWLWDDHKTHGYPPRRVFGFYSKESLQYLIQRRETRLPLNSVPHVKDNEGKAV
AGRLYQLETIARVSERFTNKYRQSLIVQATGTGKTRVAIALSKLMIDARWVKRVLFLCDR
KELRKQAANAFNQFTNEPLYVVGKSKKADRQNARIYIATYPGMMKIMDHFDVGYFDLIIA
DESHRSIYNVYGDLFKYFDALQIGLTATPIDMVSKTTFGLFGCEGRIPTANYSLEDAIAD
NNLVPYEVVTHTTEFLREGIKREKLSDEQIRELEEQGIDPNTLEFDGKALDEAIYNKDTN
RYILRNLMENGLKDRDGQLPGKTIIFARNHKHALLLNELFDDMYPQFAGRFCQVIDNYDP
RAEQLIDDFKGLDESTNKELTIAISVDMLDTGIDVPEIVNLVFAKPVKSKVKFWQMIGRG
TRLCSGLYGSDENGKPLDKQKFRIFDHWGNFEYHELHTEEAEVTATKSLAQKRFEAWVML
GAAAQRKFDKQAVDLVAHQLREQINALDEKSIAVQEKWQQKAQYSDEKVLRQLSPKTQQD
LLSILAPLMQWLDVRGQSDAMRFDMDILAAQTARYTNPEELDVLWPVIIEKVERLPPHLT
QVQQQGQRINQLRDLGWWKQASLEELEDIRIHLRGIMHLMEKDATPKFGSIQVDITEDAN
LIQTETRKTNIRSIDFKLYRQQVQGALEPLFQQNPVLKKIRNGEPVRQGELDELAKLVLI
QNPNVDIRALKEFYPQATASLDKLLRTIIGMDSDAVEVRFAQFAADNSLTSQQLRFLSLL
KNHIRDYGTIEMRQLFEQPFTHIHNEGVTGVFPDIEQIARLQKIVEELGVVTDAATV
NT seq 3414 nt   +upstreamnt  +downstreamnt
atggagcagtctctcaattttgaaatgttgcgcagccagtggccggaactggcagaactc
gcgtgtatggcggaacgctatgttcactccgatccggaaagctgtctggtcaagctgcgc
aactacaccgaattgatggtacgttggttataccgccaggaacggctgcctgaaggcatc
aaagcaaatctgtacgatttaatgaacgccgatgtcttcaccagcatgatgccggaagcc
atcatcatgaaaatggatgcactgcgtatccacggtaaccgcgctgcgcacggcggacgt
atcaaagctaaagatacttactggctgttaaaggaagcgtatttactgggaatttggctg
tatgttcgctacgcccatggtaatgttgatgactgccccaaattttctcttcctccttta
acgcaatcttcaggtcgtgcagatgataaacgtctggaagatgcaatcagggctcaggat
gaaagccgtgagcgcgaactggcgttacaacgcgcactccagcaagagcaggaaaaagcc
gaacacctcacccagcgcctaaatgaagccagatctcgcaaccagcatgttgccgacatc
ctctctattgatgaagcggaaacccgccgccgcctgattgactcccgcctgcttgctgct
gactggaatgtaggcgaagaacttagaaataccgatcaggttacgcaggagcatcctgtt
aaagaacagcctactgcaactggcgacggttatgcggattatgtcttgtgggatgaagcg
cataaaccgctggcggtggtggaagcaaaaaaaaccagcatcaatgccgagcaaggacga
attcaggctcggctatatgcagactggctggaaaaagaatacggtcagcgcccggtcatt
ttctacaccaacggctacgatatctggctgtgggacgaccataaaactcatggttatccc
ccacgtcgagtgtttggtttctacagtaaggaaagcctgcaatatcttattcaacggcgt
gaaactcgtctgccgctgaatagtgtcccgcacgttaaagataacgaaggtaaggccgtt
gccggacgtttgtatcaacttgaaactattgcccgcgtcagcgaacggtttaccaacaag
taccggcaatcgttaattgttcaggctactggtacaggcaaaacccgcgtagcgattgca
ctaagcaaactaatgattgatgcccgctgggtaaaacgcgtcctgtttctttgtgaccgc
aaagagctacgtaaacaggcggcgaatgccttcaatcagttcaccaatgagccgctgtat
gtggtcgggaaatcgaagaaagcagacaggcagaatgccaggatctacatcgccacctat
cccggcatgatgaaaatcatggaccattttgatgttggttatttcgatctgattatcgcc
gatgaatcccaccgctctatctacaacgtttacggcgatctgtttaagtattttgatgcc
ctccagattggcctgacggccacgccgatcgacatggtgagtaaaacgactttcggcctg
tttggttgtgaaggacgtatccctaccgccaactacagcctggaagatgccatcgccgat
aacaacttggttccctatgaggttgttacgcacaccacagaattcctgcgcgaaggcatc
aaacgggagaaattaagcgacgaacaaatccgtgagctggaagaacagggtatcgatcca
aatacgctggaatttgatggcaaggcgctggatgaggcgatctacaacaaagacaccaac
cgctatatcctgcgtaacctgatggaaaatggcttgaaagatcgggacggccagttgcca
ggtaaaaccatcatttttgcccgtaaccacaaacacgcactgctgttgaatgaattgttc
gacgacatgtacccgcagtttgccggacgcttctgtcaggtcatcgacaactacgatccc
cgcgccgagcaactgattgatgattttaaagggctggacgaaagcaccaacaaagagctg
accatcgctatctccgttgacatgcttgataccggcattgatgtcccggaaattgtgaat
ctggtctttgccaagccggtcaaatcgaaagtaaagttctggcagatgattggccgtggt
acacgcctctgttcggggctatacggcagcgatgaaaacggcaaaccgctggataaacag
aaattccgcatcttcgatcactggggcaattttgagtatcacgaactgcataccgaagag
gccgaagtgacagcgacaaaatcgctggcgcaaaaacgcttcgaagcgtgggttatgctg
ggggctgccgcgcagcgtaagttcgacaagcaggcggtggatttagtcgctcaccagctc
cgcgagcagatcaacgcgctggatgaaaagtcgattgccgtacaggaaaagtggcagcaa
aaagcgcagtacagcgatgaaaaagtgctgcgccagctttccccgaaaacacagcaggat
ctgctatctatcctggccccgctgatgcagtggctggacgtgcgcggtcagagcgatgct
atgcgctttgatatggatattctggcggcgcaaactgcccgttataccaaccctgaagag
ctggatgtgctctggccggtcatcatcgagaaagtagaacgtctgccgccgcacctgacg
caggtgcaacagcagggacagcggattaatcagcttcgtgatttaggctggtggaagcag
gcaagtctggaagaactggaagatatccgcattcatctgcgcggcatcatgcacctgatg
gaaaaagatgcgacgccgaaatttggttcgatacaggtggatatcaccgaagacgcgaac
ctgattcagacggaaacccgcaaaaccaacatccgctcgattgatttcaaactgtatcgt
cagcaggtgcagggagcgctggagccactgttccagcaaaatccggttctgaagaaaatc
cgcaacggcgagccggtcaggcaaggcgagctggatgagctggcgaagctggtgcttatc
cagaatccgaacgttgatatccgggcgctaaaagagttctacccgcaggcaaccgccagc
ctggataaacttttgcgtaccatcatcggtatggacagtgatgcggtagaagtacgtttt
gcacagttcgcagctgacaacagcctgaccagccagcaactgcgcttcctgtcactgcta
aaaaaccacattcgcgattacggcaccattgaaatgcgacagctttttgaacagccgttt
acgcatatccacaacgaaggcgttaccggtgtgttccctgatatagagcagatcgcccgc
ttgcaaaagatagttgaagagttgggtgttgtgaccgacgcagcgacggtataa

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