Citrobacter sp. Y3: HAP28_21925
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Entry
HAP28_21925 CDS
T10856
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy03030
DNA replication
ciy03430
Mismatch repair
ciy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HAP28_21925 (holC)
03430 Mismatch repair
HAP28_21925 (holC)
03440 Homologous recombination
HAP28_21925 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ciy03032
]
HAP28_21925 (holC)
03400 DNA repair and recombination proteins [BR:
ciy03400
]
HAP28_21925 (holC)
Enzymes [BR:
ciy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HAP28_21925 (holC)
DNA replication proteins [BR:
ciy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HAP28_21925 (holC)
DNA repair and recombination proteins [BR:
ciy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HAP28_21925 (holC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QIO41485
LinkDB
All DBs
Position
4522209..4522652
Genome browser
AA seq
147 aa
AA seq
DB search
MRNATFYLLDNDTQHDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAIRLDEALWARP
ADRFVPHNLAGEGPRGGAPVEIAWPEKRNSSPRDLLISLRVGFADFATAFTEVIDFVPYE
DSLKQSARERYKAYRVAGFNLNTATWK
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacgcaacgttctatcttctggacaacgacacacaacacgatggccttagcgcc
gtcgagcaactggtgtgtgagattgccgcagaacgttggcgcagcggcaaacgcgtgtta
attgcctgcgaagacgaaaaacaggcgattcgcctggatgaggcgctatgggccagaccg
gctgaccgtttcgtcccgcacaatctggccggtgaagggccgcgcggcggtgcgccggta
gaaatcgcctggccggaaaaacgcaacagcagtccgcgcgatctgctcatcagcctgcgc
gttggctttgcagattttgccaccgctttcacagaagtgatagacttcgtcccttacgaa
gattctctgaaacaatcggcacgcgaacgctacaaagcctaccgcgtggctggttttaac
ctgaatacggcaacctggaaataa
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