Citrobacter sp. Y3: HAP28_23110
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Entry
HAP28_23110 CDS
T10856
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ciy Citrobacter sp. Y3
Pathway
ciy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HAP28_23110 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciy03400
]
HAP28_23110 (uvrA)
DNA repair and recombination proteins [BR:
ciy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HAP28_23110 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HAP28_23110 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
QIO41702
LinkDB
All DBs
Position
4770040..4772862
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPVIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLSTRLAESFETALELSGGTAVVADMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVEAPWASLSANVHKVVLYGSGKESIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLKREARH
VFVENTPLPTISDMSIGHAMDFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtc
atcccccgcgacaaactgattgtcgtgaccgggctttcggggtcaggcaaatcctcgctc
gctttcgacaccttgtatgccgaagggcagcgtcgttacgttgaatccctttctgcctat
gcgcgtcagtttctgtcgttaatggaaaagccggatgtcgatcatattgaggggctgtct
cccgccatctcaattgaacagaaatcgacgtcccataacccgcgctcgacggtcggcacc
attaccgaaatccacgactacctgcgtctgctgtttgcccgcgttggcgaaccgcgctgc
ccggatcacgatgttccgctggcggcgcagaccgtaagccagatggtggataacgttctg
tcgcagccggagggcaaacgcctgatgctgctggccccggtgattaaagagcgtaagggc
gagcacaccaaaacgctggaaaacctggcaagccagggttatatccgcgcccgtatcgat
ggcgaagtgtgtgacctctccgatccgccaaagctggaactgcagaagaaacacactatc
gaggtggtgatcgatcgtttcaaagtgcgtgacgatctcagcactcgtctggcggaatcg
tttgagaccgcgctggagctgtccggcgggacggcggtggttgccgatatggacgacgaa
aaagcagaagaactgctcttttccgccaacttcgcctgcccaatctgcggttacagcatg
cgcgaactggaaccacgcctgttctcctttaacaacccggcgggcgcctgcccgacctgc
gatgggctcggcgtacagcaatatttcgaccccgatcgcgtgatccagaaccctgagctg
tcgctagcgggcggggccattcgcggttgggatcgccggaacttctattacttccagatg
ctgaaatcgctggcagaacactacaagtttgatgttgaagccccgtgggccagcctgagc
gcaaacgtacacaaagtggtgctgtacggttctggtaaagagagtattgaattcaaatac
atgaacgatcgtggcgatacctccgtgcgtcgccatccgtttgaaggcgtactgcacaac
atggaacgccgctataaagagacggaatccagcgccgttcgtgaagagttagccaagttc
atcagcaaccgcccgtgcgccagttgtgaaggaacccgtcttaagcgcgaagcgcgccac
gtcttcgttgaaaatacaccgctgccgaccatttccgacatgagcatcggccatgcgatg
gacttcttcaacaatctcaaactcgccggtcagcgggcgaagattgcagagaaaatcctc
aaagagattggcgaccgcctcaagttcctggtcaacgttggcctcaactatctgacgctg
tcccgttccgcggaaacgctctccggcggcgaagcccagcgtattcgactggcaagccag
attggcgccggtctggtcggcgtgatgtacgtgctggatgagccgtccatcggccttcac
cagcgcgataacgaacgtctgctggggacgctgatccacctgcgcaatctcggcaatacc
gtgattgtggtagagcacgatgaagatgcgattcgcgccgccgaccacgtgattgatatc
ggtccgggtgccggcgtccacggcggcgaagtggttgccgaaggtccgctggaagcgatt
atggcggtgccggagtccctgaccggccagtacatgagcggcaaacgcaagattgaagtg
ccgaaacagcgcgttcccgcaaacccggagaaagtgctgaaactgaccggcgcgcgcggc
aacaacctgaaagacgtgacgttaacgctgccggtcggcctgttcacctgcatcaccggc
gtgtccggttccggtaagtcgaccctgattaacgatacgctgttcccgattgcacagcgc
cagttgaacggtgcgacgatcgccgaaccggcgccgtaccgcgatgtgcaggggctggag
catttcgataaggtcatcgacatcgatcagagcccgattggacgtacaccgcgttccaac
ccggcaacgtacacgggcgtgtttacgccagtacgtgagctgtttgctggcgtaccggaa
tcacgctcacgcggctatacgccggggcgtttcagttttaacgttcgcggcgggcgttgc
gaagcctgtcagggcgatggcgtaattaaagtcgaaatgcacttcctgccagatatttac
gtgccgtgcgaccagtgcaaaggcaagcgctataaccgcgaaacgctggagattaagtac
aagggcaaaaccatccacgaagtgctggatatgactatcgaagaagcacgtgaattcttt
gatgccgtcccggcgctggcacgtaagctgcaaaccctgatggatgtcggtttgacctac
attcgtctcggccagtcggcgacaacgctctccggcggtgaagcccagcgtgtgaagctg
gcgcgcgaactgtcgaaacgcggcaccggccagacgctctatattctggatgaaccgact
acgggtctgcattttgccgatatccaacaattgctggacgtgctccatcagttacgcgat
cagggcaataccatcgtagtgattgagcacaacctggacgtcatcaaaacggcggactgg
atcgtggatctcggtccagaaggcggtagcggcggtggggaaatcctcgtctccggtacg
ccagaaaccgtggcggaatgtgaagcctcacacacggcccgcttcctgaaaccgatgctg
taa
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