Citrobacter sp. Y3: HAP28_23520
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Entry
HAP28_23520 CDS
T10856
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy00730
Thiamine metabolism
ciy01100
Metabolic pathways
ciy01240
Biosynthesis of cofactors
Module
ciy_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HAP28_23520 (thiC)
Enzymes [BR:
ciy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HAP28_23520 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QIO41773
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Position
4863446..4865347
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AA seq
633 aa
AA seq
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MSATTPKLSRREQRAQAQHFIDTLEGTAFPNSKRIYITGSQHDLRVPMREIQLSPTLIGG
SKAEPQFEENEAIPVYDTSGPYGDPDVAINVQQGLTKLRQPWIDARNDSEALTDRSSVYT
KERLADDGLDELRFTGLLTPKRAKAGKCVTQLHYARQGIVTPEMEFIAIRENMGRERIRS
EVLRQQHPGEGFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNA
NIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQ
ALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSI
MAKWCLSHHKENFLFQHFREICEICAAYDVSLSLGDGLRPGSLQDANDEAQFSELHTLGE
LTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDN
AMSKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVR
DYAAAQTIEVGMADMSDTFRAKGGEIYLKREEV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaactacccctaaattgtcccgccgcgaacagcgcgcgcaagcacaacacttt
atcgatacgctggaaggcacagccttcccgaactcaaaacggatctacatcaccggttca
caacacgatcttcgcgtcccgatgcgggaaattcagcttagcccgacgctcatcggcggc
agcaaagcggaaccgcagtttgaagagaacgaagcgattccggtgtacgacacctccggt
ccgtatggtgatccggatgtggcaattaacgtccagcaggggctgacaaagctgcgccag
ccgtggattgatgcgcgtaacgacagcgaagccttaactgaccgcagctctgtctatacc
aaagaacgtctggccgacgacggtctggatgaactgcgtttcaccggtttgctgacgcca
aaacgcgcgaaagcaggcaaatgcgtgacgcaactgcactacgcgcgccagggtatcgtc
accccggaaatggagtttatcgccattcgtgaaaacatgggccgtgaacgcatccgcagt
gaagtgttacgccagcagcatccgggtgaaggatttggcgcacgcctgccggagaacatc
acgccggaatttgtgcgtgatgaagtggccgctggacgagctatcatccccgccaacatc
aatcacccggaatcggaaccgatgattatcgggcgtaatttcctggtgaaggtgaacgcc
aatatcggcaactctgccgtcacctcctccatcgaagaagaagtggagaaactggtgtgg
tcaacgcgctggggggcagacacggtgatggacctctccaccggtcgctatatccatgaa
acccgcgaatggatcctgcgcaacagcccggtgccgatcggtaccgttccgatctaccag
gcgctggagaaggtcaacgggatcgccgaagatctgacgtgggaagccttccgcgatacg
ctgctggagcaggccgaacagggggtggactacttcaccattcatgccggagtgctgctg
cgctatgtgccgatgaccgcgaaacgcctgacagggattgtctcgcgcggagggtccatt
atggcgaaatggtgtctctctcatcacaaagagaacttcctcttccagcacttccgcgag
atttgtgaaatctgcgctgcctatgacgtgtcgctgtcgctcggcgatggcctgcgtccg
ggttcccttcaggacgccaacgacgaggcacagttctcagaactgcacacactgggcgaa
ctgaccaaaatcgcctgggagtatgacgtgcaggtgatgattgaaggtccgggccatgtg
ccgatgcagatgatccgtcgcaacatgaccgaagagctggagcactgtcatgaagcgcca
ttctacaccttaggcccgctgaccactgatatcgcaccgggttacgaccatttcacctcg
ggaattggcgcagcgatgatcggctggtttggctgcgcgatgctctgttatgtcaccccg
aaagaacaccttggcctgccaaacaaagaagatgtgaaacaggggctgattacctacaag
attgccgcccatgccgccgatctggcgaaagggcatccgggggcgcaaatccgtgataac
gcgatgtccaaagcgcgctttgaattccgctgggaagaccagtttaatctggcgctcgat
ccgtttaccgcccgcgcttaccacgatgaaaccctgccgcaggaatccggcaaagtcgcg
cacttctgctccatgtgcggcccgaaattctgctcaatgaaaatcagtcaggaagtccgt
gactacgccgccgcgcagaccatcgaagtggggatggcggatatgtcagacaccttccgc
gccaaaggcggagaaatctacctcaaacgggaggaagtctga
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