Citrobacter sp. Y3: HAP28_23875
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Entry
HAP28_23875 CDS
T10856
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HAP28_23875 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciy03400
]
HAP28_23875 (priA)
Enzymes [BR:
ciy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HAP28_23875 (priA)
DNA repair and recombination proteins [BR:
ciy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HAP28_23875 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
TrwB_AAD_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIO41833
LinkDB
All DBs
Position
4945128..4947329
Genome browser
AA seq
733 aa
AA seq
DB search
MPVARVALPVPLPRTFDYLLPEGMSSVKAGCRVRVPFGKQQERVGIVVSVSDKSELPLNE
LKAIVDVLDDEPLFSTSVWRLLIWAADYYHHPIGDVLFHALPILLRQGKPATNAPMWYWF
ATEEGQAIDLNSLKRSPKQQQALAALRQGKIWRDQVAALEFNDGALQALRKKGLCELASE
TPGFSDWRTNYAVCGERLRLNTEQATAVGAIHSASDSFSAWLLAGVTGSGKTEVYLSVLE
NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSALNDSERLSAWLKAKNGEAAI
VIGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSERIPIILGSATP
ALETLCNVRQKKYRMLRLTRRAGNARPATQHVLDLKGQQVQAGLAPALIARMRQHLQADN
QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC
GSTHMVPVGLGTEQLEQALAPFFPGVPISRIDRDTTSRKGSLEQHLAEVHRGGARILIGT
QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTH
HPEHPLLQTLLHKGYDAFAEQALAERQTMQLPPWTSHVIVRAEDHNNQQASLFLQQLRNL
IQASPLADDKLWVLGPVPALAPKRGGRYRWQILLQHPSRIRLQHIVSGTLALINTLPDSR
KVKWVLDVDPIEG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtagcgcgcgttgccttacccgttccgcttccccgcacctttgactatcttctg
ccggaaggcatgagcagcgtcaaggcaggatgtcgcgtgcgcgtgccgtttggcaaacag
caagagcgcgtcgggatcgtggtttcggtcagcgacaaaagcgagctgccgctgaatgaa
ctgaaagcgatcgttgacgtgctggatgatgaaccgctcttttcgacctctgtctggcgt
ctgctgatctgggcggcggattattatcatcatcccatcggcgatgtgctgttccacgct
ctgcccatcctgttgcgtcaggggaaacctgctaccaacgcgccaatgtggtactggttt
gccaccgaagagggtcaggccattgatctcaatagcctgaagcgttcccccaaacagcag
caggcgctggctgcgttacggcaggggaaaatctggcgcgatcaggtggctgctctcgaa
ttcaacgatggcgcgcttcaggcgctgcgtaaaaaaggcttgtgcgaactggcgagcgaa
acgcctggttttagcgactggcgcacaaattacgcggtctgcggcgaacgtctgcgcctg
aacaccgaacaggccaccgccgttggcgccattcacagtgcgtcagacagtttctccgcc
tggctgctggccggggtgacaggctcaggtaaaaccgaagtttacctgagcgtactggaa
aacgtcctcgcgcagggtaaacaggcgctggtaatggtgccggaaattggcctgacgccg
caaaccatcgcccgctttcgcgaacgtttcaacgcgccggtggaagtgctgcactccgct
ctcaacgacagcgaacgcctctctgcctggctgaaggcgaaaaacggcgaagccgcgatc
gtcattggcacccgttcctccttatttacaccgtttaaaaatcttggcgtgatcgtgatc
gatgaagaacacgacagttcctataaacagcaggaaggctggcgctaccatgcccgcgat
ctggcggtctggcgcgcccatagtgaacgcatcccgattatcctcggttcggcaacgccg
gcgcttgagacgctttgcaatgtcaggcagaaaaaataccgcatgctgcgcctgacgcgt
cgtgccggaaacgcacgccccgccactcagcatgtactcgatttaaaaggtcaacaggta
caggcaggcctggcaccggcgttaatcgcccgtatgcgccagcatttacaggccgataac
caggtaattttattcctcaaccgccggggttttgcgcctgcgttgctttgccacgactgc
ggctggattgcagagtgtccgcgttgcgatcactactacaccctgcaccaggcgcagcac
cacttgcgctgccaccactgcgacagtcagcgcccggtgccgcgtcagtgcccctcctgc
ggctccacgcatatggtgccggtcgggttaggcaccgagcagcttgaacaagccttagcc
cccttctttcccggcgtgccgatttcccgcattgaccgcgacaccaccagccgaaaagga
tcgcttgagcaacatctggcggaagtccatcgcggcggcgcaaggatcctgatcggcacc
cagatgctggcaaaaggtcaccacttccctgatgtgacgctggttgcgctgctggatgtg
gatggcgcgttgttctccgcagacttccgctcggcggagcgctttgcccaactttatact
caggtgtccggacgcgcaggacgcgcaggcaaacagggggaagtggttttgcagactcac
catccggaacatccgctgctgcaaactctgttgcataaaggctatgacgcgtttgccgaa
caggcgctggccgaacgccaaacgatgcaactgccgccgtggaccagccacgtcatcgtg
cgtgctgaagatcataataatcagcaggcttcactgtttttgcagcagctgcgtaatctg
atccaggccagcccgctggcagatgacaagctctgggtgttaggccccgttccggcgctg
gcgccgaagcgcggcggacgctatcgctggcagattttattgcaacatccatcacgaatt
cgtttgcaacatatcgtcagcggaacgctcgcgctcatcaataccttaccggattcacgc
aaggtgaaatgggtgctggatgtcgatcctattgagggataa
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