Citrobacter sp. Y3: HAP28_24640
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Entry
HAP28_24640 CDS
T10856
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ciy Citrobacter sp. Y3
Pathway
ciy00071
Fatty acid degradation
ciy00280
Valine, leucine and isoleucine degradation
ciy00310
Lysine degradation
ciy00362
Benzoate degradation
ciy00380
Tryptophan metabolism
ciy00410
beta-Alanine metabolism
ciy00640
Propanoate metabolism
ciy00650
Butanoate metabolism
ciy00907
Pinene, camphor and geraniol degradation
ciy00930
Caprolactam degradation
ciy01100
Metabolic pathways
ciy01110
Biosynthesis of secondary metabolites
ciy01120
Microbial metabolism in diverse environments
ciy01200
Carbon metabolism
ciy01212
Fatty acid metabolism
Module
ciy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ciy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HAP28_24640 (fadB)
00650 Butanoate metabolism
HAP28_24640 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HAP28_24640 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HAP28_24640 (fadB)
00310 Lysine degradation
HAP28_24640 (fadB)
00380 Tryptophan metabolism
HAP28_24640 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HAP28_24640 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HAP28_24640 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HAP28_24640 (fadB)
00930 Caprolactam degradation
HAP28_24640 (fadB)
Enzymes [BR:
ciy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HAP28_24640 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HAP28_24640 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HAP28_24640 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HAP28_24640 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QIO41971
LinkDB
All DBs
Position
5096277..5098466
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDNLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQTDLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKAEKLIEGAKAVLRQAISGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPMTAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVK
GKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKMAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLSETEDKVRP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEIIRGEKSADETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMSAGFPQRMQKDYRDAIDALFDASRFGQKNGLGFWRYKEDNKGKP
KKEEDATVDDLLADVSNAKRDFSEDEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYDVPEGLRNKARHNEPYYPPVEPA
RPVGDLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaacctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgccccaggctcagtgaacaaactcgacacggcaaccgtcgccagcctcggc
caggcgctggacgtactggaaaaacaaacagatttaaaagggctgctgctgcgttcgaat
aaagcagcctttatcgtcggtgccgatatcaccgaattcctttcgctgtttctcgttccc
gaagaacagctcagccagtggttgcatttcgccaacagcgtctttaaccgtctggaagat
ctgccggtccccacgctttctgcggttaacggctatgcgttaggtggcggctgcgaatgc
gtactggcgaccgattaccgcctggcgacgccggatctgcgtatcggtctgccagaaaca
aagctgggcatcatgccaggctttggcggttccgtacgtatgccgcgcatgttaggcgcg
gacagcgcactggagatcattgctgccggtaaagacgttggtgctgaacaggcgctgaaa
atcggtctggtcgatggcgtcgtgaaagcggaaaaactgattgaaggcgcaaaagcagtt
ttacgtcaggccatcagcggcgatctggactggaaagcgaagcgtcagccgaagctggaa
ccgctgaagctcagcaaaattgaagctgccatgagctttaccattgccaaaggcatggtc
gcgcaaacggcaggcaaacattacccggccccgatgactgcagtgaaaaccattgaagcc
gccgcgcgttttggccgtgaagaagcgcttaatctggaaaacaaaagttttgttccgctg
gcgcacaccaatgaagcccgcgcgttggtcggtatcttccttaacgaccaatatgtgaaa
ggcaaagcgaagaagctgaccaaagacgttgagacgccaaaacaggctgctgtgctgggt
gcaggcattatgggcggcggtatcgcgtatcagtcggcgtggaaaggcgtgccggttatc
atgaaagatatcaatgacaaatccctgaccctcggaatgaccgaagcggctaagctgctg
aacaaacagcttgagcgcggcaaaattgacggtctgaagatggcgggcgtgatttcgacc
attcaccctacgctggactatgccggttttgatcgcgtggacatcgtggtcgaagccgtg
gttgaaaacccgaaagtcaaaaaagcggtgctgtccgaaacggaagacaaggttcgcccg
gataccgtgctggcctctaacacctccaccattcccatcagtgaactggcaagcgtgctg
aaacgcccggaaaatttctgcgggatgcatttctttaacccggttcaccggatgccgctg
gttgagatcattcgtggcgagaaaagcgccgatgaaaccatcgcgaaagtagtcgcctgg
gcaagcaaaatgggcaaaacaccgattgtggtgaacgactgccctggcttctttgtaaac
cgcgtactgttcccttacttcgcgggattcagccagttgctgcgcgacggagcggacttc
cgcaaagtcgacaaggtcatggaaaaacagttcggctggccgatgggcccggcatacctg
cttgatgttgtcggcattgatacagcgcatcacgcgcaggccgtgatgtccgcaggcttc
ccgcagcggatgcaaaaagattatcgcgacgcgatcgatgcgctgtttgacgccagtcgt
tttggtcagaaaaacggtctgggcttctggcgctataaagaagacaacaaaggtaagccg
aagaaagaagaggatgccaccgttgatgacctgctggctgacgtcagtaacgcgaagcgt
gatttcagcgaagacgaaattatcgcccgtatgatgatcccgatggtcaacgaagtggtg
cgctgtctcgaagaaggcattatcgccagtccggcagaggccgatatggcactggtttac
ggtctgggcttccctccgttccacggcggcgcgttccgctggctggatacgctcggcagc
gcgaagtatctcgatatggcgcaacagtatcagcacctcggtccgttatacgacgttccg
gaaggtctgcgtaataaagcgcgtcataacgaaccgtattatcccccggttgagcctgcc
cgtccggtcggcgacctgaaaacggcttaa
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