Carettochelys insculpta (pitted-shelled turtle): 142001056
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Entry
142001056 CDS
T11194
Symbol
PRDM16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
ciz
Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz00310
Lysine degradation
ciz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
142001056 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142001056 (PRDM16)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142001056 (PRDM16)
Enzymes [BR:
ciz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
142001056 (PRDM16)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
142001056 (PRDM16)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
142001056 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PRDM2_PR
zf-C2H2_jaz
SET
zf-C2H2_6
zf-C2H2_11
C2CH-3rd_BIRD-IDD
zf-H2C2_5
Zap1_zf1
zf-BED
zf-met
C2CH-4th_BIRD-IDD
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
142001056
NCBI-ProteinID:
XP_074832010
LinkDB
All DBs
Position
23:19162694..19689488
Genome browser
AA seq
1165 aa
AA seq
DB search
MRSKARARKLPKSDSEIVNNMYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDF
TPKEGSPYEAPVYIPDDIPIPPDFELRESSIPGAGLGIWAKKKIEVGERFGPYMTIPRTS
LKETNFGWEQVLTDPEVASQEGCIKKIADDLGNEKFCADTNQTGAGNWLKYIRVACSCDE
QNLAVCPINDQVYYKVIKEIKPGEELLVYMKEGAYSLGNMPPNLEEEHTFRCEDCDELFQ
SKLDLRRHKKYACNSVSLLYETLNEEIKQEGLSDGQAYECKDCERMFPNKYSLDQHMIIH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGGIFAPGLPLTPTSMMDKSKPSPNLNHASL
GFNDYFPSRPHPGGIPFSPAPPAFPALTPGFPGIFPPSLYPRPPLLPPTPLLKSPLNHTQ
DAKLPSPLGNPALPLISAVNNSNQPVLGEEKFESSLENSYLEKLKARNSDMSDGSDFEDV
NTTTGTDLDTTTGTGSDLESDAESDKTKDKSKQAENKPDFVSSSVSTSSTNNVSELPLFY
SQHSFFPPPEEQLRPTTGAANDSIKAIASIAEKYFGPGFMGMQEKKIGSLPYHSMFPFQF
LPNFPHSLYPFTDRTLNHNLLVKAEPKSPRDLHKVGSTSSESPFDLTMKPKEIKPILPPP
KILPAPSSGEEQPLDLSIGNRIRASHNGGREPQKNHIYGERKLMASEVLPKISQAQLPQQ
PSLHYAKPSPFFMDPIYSRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLES
FAAMKADTGTSLQPLPHHSFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHL
RTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKH
EHENVPVSQHSGVITNHLGTSASSPNSESDNHALLDEKEDSYFSEIRNFIANNEMNQAST
LTDKRPEIQDIDSNSQCHGLANEKTEDMDEEEEELEEEDDDSLTGKSQDETVSPTTEPRG
TFEDEEDEEPTSLTMSFDHTRRLMQ
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagatctaaggcgagggcgaggaagctgcccaaaagtgacagtgagattgtaaataat
atgtatgagacagaccctgatctcctggctggtgagagtgcggaggaggaaacagaggac
agtattatgtcccctatccccgttggacctccatcaccttttcctaccagtgaggacttc
acccccaaggaaggctcaccttacgaagcccctgtctacattcccgatgacattccaatc
ccaccagactttgaactcagagaatcctcgattccaggggcagggctggggatttgggcc
aaaaagaagattgaagttggggaaagatttggaccttacatgacaataccaaggacctca
ttaaaggaaacaaactttggatgggagcaagtattgactgatccggaggtggcatctcaa
gagggctgtatcaaaaagattgccgatgacctgggaaatgaaaaattctgcgctgacact
aatcagactggagctggaaattggctgaaatacattcgagtagcatgttcctgtgatgaa
caaaatctagctgtatgtcccattaatgaccaggtctactataaagttattaaagaaatc
aagccgggagaagaactgctggtgtatatgaaggaaggtgcctattctcttgggaacatg
ccacctaatttggaagaagagcacacgttccgttgtgaggactgtgatgaactcttccag
tcgaagctggacctgcggcgacacaagaaatatgcctgcaattctgtcagcttgctgtac
gagacgctgaatgaagagatcaaacaggaagggctaagcgatgggcaggcctacgagtgc
aaagactgtgagagaatgttccccaataaatacagcttggatcagcacatgatcatccac
actgaggagagggagtacaagtgtgatcaatgtccaaaagccttcaactggaaatcaaac
ctgattcgccaccagatgtcacatgacagcggcaaacgatttgaatgtgaaaactgtgtg
aaggtgtttactgaccccagcaacctccagcggcacatccgttcccagcacgttggcgca
cgagcacatgcctgcccggactgcggcaaaaccttcgccacctcgtctggcctcaaacaa
cacaagcacattcacagtactgtcaaacctttcatatgtgaggtctgccacaaatcctac
acgcagttctccaacctctgccgtcacaagcggatgcacgcggactgtcgcacccagatc
aaatgcaaggactgtggccagatgttcagcactacctcctctctcaacaagcaccgacgc
ttctgtgagggcaagaaccattacaacccaggggggatttttgcccctggcctcccttta
acacccacctccatgatggacaaatccaaaccctcccccaacctcaaccatgccagcctg
ggattcaacgattacttcccatcccggcctcacccagggggtattccattctcgcctgct
cccccagcctttcctgcccttactccagggttcccagggattttccccccctctctatac
cccaggcctcctttgttgcccccaaccccactacttaagagccccctgaaccacactcaa
gacgccaagcttccaagcccactggggaacccagcgctgcctctgatttccgctgtgaat
aacagcaaccagcctgtcttgggggaggagaaatttgagagcagcctggaaaactcctac
ctggagaagctaaaagccaggaacagcgacatgtctgatgggagcgacttcgaggatgtc
aacaccaccaccggcacggaccttgacaccaccacggggactggctctgacctggagagc
gacgcggagagtgacaaaacgaaagacaaaagcaaacaggcggagaacaagccagatttt
gtcagcagctcggtgtccaccagctccaccaacaatgtgagcgagctcccccttttctat
tctcagcactccttcttccctccccccgaggagcagctgcgacccacaacgggggcagcc
aatgactccataaaagcgatcgcctccattgccgagaaatattttggacccggttttatg
gggatgcaggagaagaagatcggatccctcccataccactccatgttcccatttcagttc
ctgcccaactttccccattcgctgtacccctttacggaccggaccctcaatcacaacttg
ctagtcaaggcagaaccaaagtcacccagggaccttcacaaagtagggagcaccagctca
gagtctcccttcgatctcaccatgaaaccaaaagagattaagccaatcttgccacccccc
aagatcttgccagccccatcgtctggggaggaacagccactggatctaagcatcggcaac
cgcatccgagccagccacaatggagggagggagccccagaaaaaccacatctatggggaa
aggaaactaatggccagtgaagtactacccaagatttctcaggctcagctcccacagcag
ccatccctgcattatgctaagccatcacccttttttatggaccccatatacagcagggtg
gagaagcggaaggtgacagacccagtgggtgccctaaaggagaagtacttgcggccttcc
ccgttgctttttcacccgcagatgtcagccatagaaaccatgacagagaaactggagagt
tttgcagccatgaaagcagacactggcacatccctacagcctctaccacatcactccttc
aacttccggtcaccacccccaacgctgtcagaccccatcttgcgcaaaggcaaagagcgc
tacacctgcaggtactgcggtaagattttcccccgatcagcgaatctgacaaggcacctc
cgaacacacacaggagaacaaccctacaggtgtaaatactgtgacaggtcattcagcatt
tcctctaacctccagcggcacgttcgaaacatccataacaaggagaagccattcaaatgt
cacctgtgtaaccgatgctttgggcagcagaccaatttggaccgacacctgaagaagcat
gaacatgagaatgttccagtgagccagcactctggagtcattactaaccaccttgggacc
agcgcctcctccccaaactcggagtcagacaaccatgcacttttagatgagaaagaggac
tcgtatttctctgaaatcagaaattttattgcaaataatgagatgaatcaagcatcaact
ttaacagataaaaggccagaaatccaagacattgatagcaactcccagtgtcatgggtta
gcaaatgagaaaacggaagacatggatgaggaggaagaagaactggaggaggaagatgat
gatagcctgaccgggaagtcacaggatgaaacagtatcacccacgacagagccacgagga
acgtttgaggatgaggaggatgaagaacccacatccctcaccatgagctttgaccatacc
cgaaggcttatgcaatga
DBGET
integrated database retrieval system
