Carettochelys insculpta (pitted-shelled turtle): 142001097
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Entry
142001097 CDS
T11194
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142001097 (CLSTN1)
Cell adhesion molecules [BR:
ciz04515
]
Cadherins
Cadherin related
142001097 (CLSTN1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Toxin_R_bind_N
EphA2_TM
Glyco_hydro_16
V_ATPase_I
PFF1_TM
Cadherin_C_2
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
142001097
NCBI-ProteinID:
XP_074832128
LinkDB
All DBs
Position
23:complement(6863256..6941433)
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AA seq
977 aa
AA seq
DB search
MLCPGMLCPRLAPAWLLAAGLLCGGVWAARVNKHKPWIETTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCEL
QKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPAFKEKSYKATVIEGKRYD
NILKVEAVDADCSPQFSQICTYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPNIHLETCDEPITSIQ
ATVELETSHIGKGCDRDTYSEKSLHRLCGVSSGTAELLPPPSSTANWTIGLPTDNGHDSD
QVFEFNGTQAVKIPDGIVTVDLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYSL
YVHNCRLVFLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLSVEFPTVILYVDGVSYD
PFPVTEDYPLHPSKIETQLVVGACWQEYTGNENDTETVPETSAGGELHMAQFFRGNLAGL
MIRSGKLENKKVIDCLYTCKEGLDLQIADGIGKGMKISVNPSQSTLTLEGDDIDRFDKAM
QHISYLNSRQFPTPGIRRLKITSNVKCFSEDACIAVPFVDGYIMVLQPEEPKISLSGINH
FARSASEFESPEGVSLFPELHIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDTCEV
TVLGEELNQEQESLEVDMTQLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHT
ASLFDRKFKLICSELNGRYVSNEFKVEVNVIHTANPVEHANHIAVQPQFVHPVHHTFVDL
SGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMD
WDDSALTITVNPMETYEDQHSSEEEEEEEESEDGEEEDDITSAESESSEEEEGEQEEDQQ
NVNRQQQLEWDDSTLSY
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccccgggatgctctgcccccgcctcgcccccgcctggctcctggccgctggg
ctgctctgcggaggggtctgggctgctagagttaataagcacaagccatggattgaaacg
acctatcacggtatagttacagaaaatgacaacacagtactcctggatccccccttgata
gcactggataaagatgcacctctgcggtttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcacgggcagaatgttccctttgaagctgtggta
gtggataaatccactggtgaggggataatacgctctaaagagaaacttgattgtgagcta
cagaaggactacacattcaccatccaggcctatgattgtggaaagggtccagatggagct
aatgcaaaaaaatcccacaaagcaacagtacatattcaggtgaatgatgttaacgagtat
gcgccagcttttaaagagaagtcctacaaagcaacagttattgaggggaagaggtatgac
aacatcttgaaagtagaagctgtggatgcggattgttctccccagttcagccagatatgc
acctatgaaattgtaactccagatgttccctttgctattgacaaagatggttatatcaaa
aacacagaaaagctaaattatggcaaggagcaccaatataagcttacagtgactgcatat
gattgtgggaagaaaagagctgctgaggatgtactggtgaaaattagtattaagcctact
tgcaagccaggctggcaaggctggagcaaaagaatagaatatgagcctgggactggttct
ctagctctgttccctaatatacatttggagacctgtgatgaacccataacttcaatacaa
gcaacagttgaactagagactagtcatattgggaaaggttgtgacagagatacttactct
gagaaatcccttcacagactctgtggtgtttcctctggcacagctgaactgcttccacct
ccaagtagcactgctaactggacaataggacttcctactgataatggccatgacagtgac
caggtcttcgaatttaatggcactcaagctgtgaagattccagatggtattgtcacagtt
gatctaaaagaacccttcatgatttcggtgtggatgaggcatgggccaggtaccaaggag
aaggagacaatactctgcaattcagacaagacagatatgaaccggcaccactactctctg
tatgtgcacaattgccgacttgttttcctgttccgccaagatccttcagaaggaaaaacg
tacaaacctgctgaattccattggaaactcaaccaggtatgtgacaaggaatggcatcat
tatgtcctcagtgttgaatttccaacagtaatactttatgtagacggagtttcatatgat
cctttcccagtgactgaggattacccactacatccttccaagatagaaactcagctggta
gttggagcatgttggcaagaatatacaggaaatgaaaatgacactgaaactgtgcctgag
acatctgcaggtggcgaactccacatggctcagtttttccgaggcaatctggccggatta
atgatccggtctggtaaattggagaacaagaaggtgatagactgcctttacacctgcaag
gaaggattagatttacaaattgctgatggcattggcaaaggcatgaagatcagtgtgaac
cccagccagtcaacactgaccttggaaggggatgatattgacaggtttgataaagccatg
cagcacatttcctacctgaattcccgccagttcccaacacctggaatccggaggctaaaa
atcaccagtaatgtcaagtgtttcagtgaagatgcctgcattgccgttccctttgtggat
gggtatataatggtcttgcagcctgaggaacccaagatcagcttgagtggcatcaatcat
tttgcccgttctgcttcagagtttgagagtccagagggcgtttctctctttcctgagctt
cacataatcagcaccatcactcgggaggtggaaccggagggagatggagatgaggatcct
acggttcaagagtctctggtatcggaagagatcatgcacaacttggatacatgtgaggtc
acagtgctaggagaggagctaaatcaggagcaggaaagcctggaggttgacatgacacag
ttacagcagaagggaattgaaatgagcagctccaaccttggcatgatcatcacaggtgtt
gataccatggccagctatgaggaggttttgcacttgatacgctacagaaactggcacact
gcctccctgtttgaccgaaagttcaagttgatctgttctgaacttaatggccgttatgtc
agcaatgaatttaaagtggaggtgaatgttatccatacagctaatccagttgaacatgca
aaccatatagctgtgcaaccacagtttgttcatccagtgcatcatacatttgttgacctg
tccggtcacaacctcgctaatccgcaccccttttcagttgttccaagcactgctacagtt
gtcatcgtcgtgtgtgtcagttttctggttttcatgattattcttggtgtgttccgaatc
cgagctgcgcatcagagaaccatgcgtgatcaggatactggcaaggaaaatgaaatggat
tgggatgactctgccttgaccattactgtgaatcctatggagacctatgaagatcagcac
agcagtgaggaggaggaggaggaggaagaaagtgaagatggcgaggaagaagatgacatt
actagtgcagagtctgaaagcagtgaggaagaggaaggggagcaggaagaggaccaacag
aatgttaacagacagcaacagctggaatgggatgactctactctcagctattga
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