Carettochelys insculpta (pitted-shelled turtle): 142001140
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Entry
142001140 CDS
T11194
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03013
Nucleocytoplasmic transport
ciz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142001140 (SRRM1)
03015 mRNA surveillance pathway
142001140 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142001140 (SRRM1)
03041 Spliceosome [BR:
ciz03041
]
142001140 (SRRM1)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142001140 (SRRM1)
Spliceosome [BR:
ciz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
142001140 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
142001140
NCBI-ProteinID:
XP_074832180
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Position
24
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AA seq
897 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEDKESREKRDRSRSPRRKSLFPRR
KTRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSVTPAPEKKEETPEPEPSVQTKETLIQ
EATSTSDILKAPKPEPVPDTKETSPERNAKKEREKEKEKTRQRSPSRSKSRSRSHSPSHS
RPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLS
GSSSSSSSSRSRSPPKKPPKRIVSSPPRKTRKLSPSASPPRRRHRPSPPASPPPKPRKSP
TPQPSSRGRKVRGSVSPGRASAPKRKSIEKRESPSPAPKPRKVELSESEEDKGGKMAVAD
SVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSPSPSPRKRQKD
SSPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRHSPTPRRYSPPIQ
RRYSPSPPPKRRTATPPPPPKRRASPSPQPKRRVSHSPPPKQRSSPGAKRRSPSLPSKHR
KGSPSSRSNRETRSPLQNKRHSPSPRPRASHTSASPPPLRRGASSSPQRRQSPSPSTRPI
RRVSRTPEPKKTKAPTPSPQSVRRVSSSRSASRSPEPAPKKHQAPPSPTRSHSPSTNWSP
PHVKKVQSPTQSPSPVRNSDQEGAGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAA
AAAAAATTSSAQEDQEAETEPKKETESEAEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggcttcttccgtggaacaagtgcggagcaggacaatcgcttcagcaacaaa
cagaagaagctgttgaagcagctgaagtttgcagaatgtctggagaagaaagtggacatg
agcaaagtaaacttggaagtaatcaagccttggataacaaaacgagtaacggaaatcctt
ggatttgaagacgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatgggaaaaatgctagagag
ttcatgggtgaactgtggccattgctgttaagtgcgcaagaaaacattgctggtattccc
tctgctttcctggagctcaagaaagaagaaataaaacaaagacagattgagcaagagaag
ttggcgtctatgaagaaacaagatgaagataaagacaagcgggacaaagaggacaaagag
agtagagaaaaaagggacagatccagaagcccaagaagaaagtctctctttcctagacgc
aaaacaaggtctccttctccgagaaggagatcatcaccggtcagaagagagagaaaacgt
agccattctcgatctcctcgtcacagaaccaagagccgtagtgttactcctgcgccagaa
aagaaagaggagactccagaaccagagccttctgtgcagacaaaggaaactttgattcaa
gaggcaacatcaactagtgatatcttgaaagcacccaagcccgaaccagtaccagatact
aaagaaacttccccagaaagaaatgcaaagaaggagagagagaaagaaaaagagaagact
cgtcaaagatccccatcacgttccaagtcacggtctcgctcacattccccctctcattct
agaccaagaaggcgtcatagatcacggtcaaggtcttactctcctagaaggcggccaagc
ccaagacgacgaccatctcctaggagaaggagtcctccaaggcgcatgcctcccccgccc
aggcacagaagaagtagatcccctgtgaggcggagaagacggtcatcggcctcgttatct
ggcagcagcagctcctcttcttcttcgcgctctcgatcgccaccaaaaaaaccaccaaaa
agaatagtgtccagtcctcctcgtaaaacacgtaaactttctccttctgcaagccctcca
aggcgaaggcacaggccttccccacctgcaagtccacctccaaaaccgcgcaagtctcca
acacctcagccatcaagccgtggaaggaaagtccgtgggtctgtttctcctggtagagcc
tcagcacctaaacgtaagagtattgaaaaaagagagtctccctcaccagcaccaaaacct
agaaaagtagaattgtctgaatcagaagaagacaaaggtggcaaaatggctgtagcagat
tctgtgcaacagagacgtcagtacagaaggcaaaaccaacagtcttcctctgattctggt
tcatcgtcttcctctgaagaggaacgtccaaaaagatcaaatgtgaagaatggtgaagta
ggtagacgcagacgacactcacatagtccgtcaccttctccacggaaacggcaaaaggac
tcttcccctcgtaggagaaggaggagtccatcaccgccacctgccagaagacggcgctct
ccttctcctgcccctcctccaaggaggcgcagatcaccttcgttgcctcgacgaagatct
ccatcaccacctccacgcaggcactcacctactcccagaagatactctcctccaatacag
agacgatactctccttccccgccacctaagcgaagaacagctactcccccacctcctcca
aaacgaagggcatcaccttctccacaacccaagcgcagagtctctcattctcccccacca
aaacaaagaagttctccaggagcaaagagacgttcgccatcgctaccttcaaagcatagg
aaaggttctccttccagcaggtctaatcgtgaaacccgttccccactacaaaacaaacgg
cattcaccttctccccggcctagagcttcacatacctctgcaagtccaccaccactgcga
aggggagcttcctcttcaccccagagaagacagtctccatctccaagcactagacccatc
aggagagtgtcaagaaccccagaacccaagaagacaaaggctcccacaccaagtccacag
tctgtgagaagggtgtcttcatccaggtcggcgtcaaggtcgcctgagccagcacctaag
aaacatcaagcacctccatctcctactcgatctcattccccctccactaactggtcgccg
ccacatgtgaaaaaggttcaaagccctacacagagtccatcccctgtaaggaattctgac
caggaaggagctggaaagaaaaagaagaaaaagaaggataaaaagcataaaaaggataaa
aagcacaagaaacacaaaaagcataagaaggagaaagctgcagctgctgctgcagcagct
gctgctgcagctgcagctactacttcatcagcccaggaagaccaagaagcagagacagag
cccaaaaaggagactgagagtgaagcagaagataacctggatgatttagaaaaacatctg
cgagagaaggcactgaggtcaatgagaaaggcgcaagtgtcaccaccatcttag
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