Carettochelys insculpta (pitted-shelled turtle): 142001610
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Entry
142001610 CDS
T11194
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142001610 (DSCAML1)
Cell adhesion molecules [BR:
ciz04515
]
Immunoglobulin superfamily
Other
142001610 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
142001610
NCBI-ProteinID:
XP_074833118
LinkDB
All DBs
Position
25:1750061..2043641
Genome browser
AA seq
2029 aa
AA seq
DB search
MYLIWTALRGFAHAEDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAALRWYLATG
DDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKAVFR
EPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITFYGGLYI
SDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTILDGFQSREVKAGQLVE
LPCIASGYPNPAIRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFGSAE
VTGSLTVIDPLHVSLTPKKLKTGIGSTVILSCALSGSPEYAIRWYRNTDLVVLDDYISLR
GLSNETLLITAAQKSHSGAYQCFATRKAQTAQGFSIVVLEDGTPRIVSSFSEKVVNPGEQ
FSLMCAAKGAPPPTITWALDDEPIQRDSGHRTNQYTMSDGTTVSHMNVTSPQIRDGGVYR
CAARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKDSLL
LPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQPFEF
PPASIGQLLYIPCVVSSGDMPIRITWRKDGQVILSGSGVTIESKEFMSSLQISSVSLKHN
GNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWK
HAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLT
VKIPAMITSHPNTTIAIKGQMKELNCTARGERPIIIRWEKGDTVIDPDRNVRYAIATKDN
SDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMN
LRWTQRFDGNSIITGFDIEYKNKSDTWDFKQSTRNISPTINQANIVDLHPASVYSIRMYS
FNKIGRSEPSKELTIITEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRGYQI
GYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINAT
TLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQN
ITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVPSSA
SSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLSRGQQYMLW
VAAVTSAGRGNISEKVTVEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPAPAIKWT
KDSEDSAIPVAVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNSWGFDTIIVNLLVQVPP
DQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSTERSFKLDS
LKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLHGWS
SGGCPITAIVLEYRPKGNWVWQSLKTNSSNEVFLTELREATWYELRMKACNSAGCGNESA
QFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGAALLFIIRKKRKEKRLKRL
RDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPV
TDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHGTRNRY
SSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESA
SSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEP
GICRFTASPPKPQDSDRGKNVAVPIPHRANKSDYCNLPLYMKSEAFFRKPDIHDPCPVVP
PREASIRNLARAYHTQTRHMTLDPGSKPLGLPHPGSSATTLPQRTLTMPVSANTTPAADP
TTATSAEPRMPTHTKMGGSRDSLLEMSTSGIGRSQKQGAGAYSKSYTLV
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgatctggacagcactccgaggttttgcgcacgctgaagatgttggaaccagc
ctctactttgtgaatgactctctccagcaggtgaccttctccagcacagttggggtggtg
atcccctgcccggcagcagggtcccccagcgctgcccttcgctggtacctcgccacaggg
gacgacatctatgacgttccacacatccggcacgtccatgccaatgggactttgcagctc
taccccttctcgccgtcagccttcaatagctttatccacgacaatgactacttctgtacc
gcagagaactctgccggcaaaatcaggagccccaatatccgtgtgaaagcagttttcagg
gaaccttacaccgtccgggtggaggatcaaaggtcaatgcgtggaaacgtggctgtcttc
aagtgcctcatcccttcttcagtgcaggaatatgttagcgtcgtgtcctgggagaaagac
acggtttctatcatcccagaaaataggttttttattactttttatggcggtttgtacata
tcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaagcacaagtac
agtggagagacgcgccagagcaatggggccaggctctctgtgtcagacccagcagaatcc
atccccaccatcctcgacggctttcagtccagggaggtaaaggcaggccagctagtggag
ctgccctgcatcgcttccgggtacccgaacccagccatccggtggatcaaggatgggcgg
ccgttgcctgcagacagtagatggaccaagcgcatcacgggcctgacaatcagcgacctg
cgtgtggaggacagcgggacgtacatctgtgaggtcacaaacacctttgggtcagcagag
gtcactgggtccctcacagtcatagaccctctgcacgtgagcctcacgccaaagaagctg
aagacgggcatcggcagcacggtcatcctctcctgcgccctgagcggctcgccggagtac
gccatccgctggtaccgcaacaccgacctggtggtgctggatgactacatctccctccgg
gggcttagcaacgagaccctcctcatcactgccgcgcagaagagccactccggggcctac
cagtgctttgccacccgcaaagcccagacggcacagggcttctccatcgtcgtgctggag
gatgggaccccccggatcgtctcctccttcagcgagaaagtagtcaacccgggcgagcag
ttctccctgatgtgtgccgccaaaggcgctcccccacccaccatcacctgggccttggac
gacgagcccatccagcgggacagcgggcatcgcaccaatcagtacaccatgtcggacggc
accactgtgagccacatgaacgtgaccagcccacagatcagggacggcggggtgtaccgg
tgtgccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaacgtaagaggt
cctcccagtatccgagccatgaagaatataacagcagtggcgggtagggacaccttcatc
aactgcagggtgatcgggtacccgtactattccatcaagtggtacaaggactccttactg
ctgccggataaccaccgccaggtagtctttgagaatgggacccttaagctgatggatgtg
cagaagggcatggacgaaggggagtatctctgcagcgtcctgatccagccgcaactctcc
atcagtcagagcgtccatgttaccgtgaaagtccctcccttgatccagcccttcgagttc
ccgccagcctccatcgggcagctcctgtacatcccctgcgtggtctcctcgggggacatg
cccatccgcatcacctggcggaaggacgggcaggtgatcctctctggctcgggcgtcacg
atcgagagcaaagagttcatgagctccctgcagatctccagcgtctccctcaaacacaac
ggcaactacacttgcatcgccagcaacgccgccgccaccgtcagccgggagcggcagctg
atcgtgcgagtgccacctcggtttgtggtccagcccaacaaccaggacggcatctatggc
aaggctggggtgctgaactgctctgtggacgggtacccgccgcccaaggtcatgtggaag
cacgcgaaaggaagtgggaacccgcagcagtaccatcctgtgcccctcacgggccgcatt
caaatccttcccaacagttcgctgctcattcgccacgtgctggaggaggacattggctat
tacctttgccaggccagcaacggcgtcgggacggacatcagcaagtccatgttcctcacc
gtcaagatcccagcgatgatcacttcccaccccaacacaaccattgccatcaagggccag
atgaaggagctgaactgcaccgctcgaggggagcggccaatcatcattcgctgggagaaa
ggcgacacggtcatcgaccccgaccgcaacgtgcgatacgccatcgccaccaaggacaac
agtgacgaggtcatttcaacgctcaagctcaaaccagctgaccggggggactctgtcttc
ttctcatgccatgcgatcaactcctacggcgaagacagaggcttgatccagctcactgtc
caagagcctcctgaccccccggagctggagattcgggaggtgaaagcccgaagcatgaac
ttgcgctggacgcagagattcgatggaaacagcatcatcactgggtttgatattgagtac
aagaataagtctgatacctgggattttaagcaatctacccgcaacatctcccccaccatt
aaccaggctaacatagtggatctgcacccagcctccgtgtacagcatccgcatgtactcc
ttcaacaagatcgggcgcagcgagcccagcaaggagctcaccatcatcacagaagaagca
gctccggatgggccccccatggatgtcaccttgcagccaatgacctcacagagcatccaa
gtcacttggaaggccccaaagaaggaactccagaatggggtgatccggggctatcagatc
ggctaccgggaaaacagccctggcagcaacgggcaatacagcatcgtggagatgaaggcc
acaggcgacagtgaggtctacaccttggacaacttgaagaagtttgcacagtatggggtg
gtggtgcaggcattcaaccgtgcagggacggggccctcctccagcgagatcaatgccacc
acgctagaggatgttcccagccagccccctgagaatgtgcgagcattatccatcacatcg
gacgtggctgtgatctcctggtcggagcctccacgcagtaccctgaatggtgtgctgaag
ggatacagggtgatcttctggtctctctacatggatggagagtggggcgagatgcagaat
atcaccaccacgcgggagcgagtggagctgcgggggatggagaagttcaccaactacagc
gtccaggttctggcatacacgcaggcaggggatggtgtgcgcagcagtgtgctttacatc
cagaccaaggaggacattccaggccctcctgctgggataaaagctgtcccatcttctgcc
agcagtgtggtcgtgtcctggcttcccccagctaagcctaatgggatcatccggaagtac
accatcttctgctccagcccggggtccgggcagccagcccccagcgagtacgagaccagc
cccgagcagctcttctaccgcatcgcccacctcagccgtgggcagcagtacatgctgtgg
gtggcggccgtgacttcggcaggacgtgggaacatcagcgagaaggtcaccgtagagcct
gctgggaaagccccggccaagatcatctccttcggtggcaccgtcaccactccgtggatg
aaggacgtgaggctgccgtgcaattcggttggggagccggccccggccattaaatggaca
aaggacagcgaggattctgccatcccggtggcagtggatggacaccggctgatccaggcc
aacggcacgctggtcctgcgctcagtgaaagcagaggattctgggtattacacctgcact
gccaccaacagttggggctttgataccatcatcgtcaacctgctggtgcaagtccctccg
gaccagccgcgtctgactgtctctaaaacctccgcgtcgtccatcacgctggcctggatt
cctggggacaacggcggcagctccatccgaggctttgtgctgcagtactcggtggacaac
agcgaggagtggaaggacgtgttcatcagctccaccgagcgctccttcaagctggacagc
ctcaagtgcggcacatggtacaaggtgaagctggcggccaaaaacagcgtgggggccggg
cggatcagtgagatcattgaggccaagacccacggcagagagccctccttcagcaaggac
cagcacctcttcacccacattaattctacccatgcccggctgaacctgcacggctggagc
agtgggggctgccccatcacagccattgtcctggagtaccggcccaagggcaactgggtg
tggcagagcctgaagaccaacagctccaacgaggtcttcctgacggagctgcgcgaggcc
acgtggtacgagctgcggatgaaggcctgcaacagcgccggctgcggcaacgagagtgcc
cagttcgccacgctggactacgacggcagtaccatacccccaatcaagtctgctcagggg
gagggggacgacgtgaagaagcttttcaccatcgcctgccctgtgatcctggccacgctc
ggtgcggccctgctcttcatcatccgcaagaagaggaaggagaagcgtctgaagcggttg
agagacgcaaagagcttggcagaaatgctgatcagcaagaacaaccggagctttgacaca
ccagtgaaagggccgccccaggggccccggctgcacatcgatatcccccgcgtgcagctg
ctcatcgaggacaaggagggcatcaagcagctgggggacgataaagctacgatacccgtg
acagacactgagttcagccaagctgtgaatccccagagcttctgcacgggggtgtctttg
caccatccggctctgatccagaacacagggcccttgatcgacatgtctgatattcgacct
ggaaccaaccccgtgtcccggaagagcgtcaagtctgcacacggcacccggaacaggtac
tccagccaatggacgctcaccaaatgccaagcgtctacgccggcccgtacgctgacatcg
gactggaggacagtggggtcccagcacggaattacggtcacagagagcgacagctacagc
gccagcctctctcaggacacagacaaagggcggaacagcatggtgtctacggagagcgcc
tcatccacctatgaggagctggcccgggcctacgagcacgccaagctggaggagcagtta
cagcacgccaagtttgaaatcacagagtgcttcatctccgatagctcttccgaccagatg
accacagggaccaacgagaatgcagacagcatgacgtccatgagtaccccgtccgagcca
gggatctgccggttcaccgcctcgccccccaagccgcaggacagcgacagaggcaagaac
gtggccgtgcccattccgcacagagctaacaagagtgattactgcaaccttcccttgtac
atgaaatcagaagcattcttccgcaagcctgacatccacgatccgtgtccagtggtcccg
cccagggaagcctccatccgaaacctagcccgggcttatcacacgcaaacgaggcatatg
acgctagacccaggcagcaagcctttgggcctgccacacccagggtcttccgcaactact
ttacctcaaagaactctcaccatgcctgtctcagcaaacaccactcctgctgccgatccc
acgactgccaccagcgctgagccacgcatgcccacgcacaccaaaatgggaggctccaga
gactctttactagaaatgagcacatctggtatagggaggtcacaaaaacaaggggctgga
gcatactccaaatcctacactcttgtgtag
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