Carettochelys insculpta (pitted-shelled turtle): 142001926
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Entry
142001926 CDS
T11194
Symbol
DDX20
Name
(RefSeq) putative ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142001926 (DDX20)
Enzymes [BR:
ciz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142001926 (DDX20)
Spliceosome [BR:
ciz03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
142001926 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
142001926
NCBI-ProteinID:
XP_074833690
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Position
26:14320708..14331622
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AA seq
780 aa
AA seq
DB search
MAVPAAPPAECRLRTRDVLIPDGPADFGSLLLSAPVLAGLEAAGFLRPSPVQLKAIPLGR
CGLDLIVQAKSGTGKTCVFSTIALDSLILENPATQILILAPTREIAVQIHAVITTIGIKM
EGLECHVFIGGTPLNQDKMRLKKCHIAVGSPGRIKQLIELDCLNTASIRLFILDEADKLL
EEGSFQEQVNWIYSSLPANKQMLAVSATYPETLAKALTRYMRDPTFVRLNPMDPSLIGLK
QYYKIVNSHSLPHKTFEEKAQHLQDLFRRIPFNQALVFSNLHSRAQHLAEILTSKGFPAE
CISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPLHWETYMHRI
GRAGRFGTLGLAVTYCCRGEEENMMMKIAQKCNLQLLPLPEPVPTGLMEQFAEWDVEVTA
VTDADASVNTPVLTHKKPAELVQHTSINSGALVPRCDPASENSSMSKLRRVFKQKQLLKG
SKDHANAGKTSKSPKTFNFSLQQQNQMAATCKMTEQNVDQHLDKETLKNTLPKIPCLSSF
KNQPVALPWSFAEFVEDYEYFIKEGLEKRVEIVRSYTGPGEQYQHPKNGAFEKKGIEEIM
PSVADNASFEDTDSDSNSYSSGASAHSRGNKSYLEASSDTQERSDILIMDQASQNYSQSM
SCSLSPEEHQQKTQIENHRQMEKKLVKQNSKWFKKSHHQQFLSPSKREAQEDCSYSPQDG
STPGFPCETQAYEDYWKSYYRAWQSCYASHSYHRKFHWHFNWMAAYHANSVYLEELLKTD
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcccgccgcgcctccggcggagtgcaggttgcgcacgcgggacgtgctgatc
cccgacggcccggcggacttcgggtcgctgctgctgtcggccccggtgctggcggggctg
gaggccgccgggtttctaaggccttccccggtacagctcaaggccatcccgcttgggcgc
tgcggcctcgatctcattgtgcaggccaaatctggaactggcaaaacctgtgtgttctca
accattgcccttgattctcttatactggaaaacccagcaacccagatcctgatcttagct
cctacaagagaaattgcagtgcagattcatgcagttatcacaactattggaatcaaaatg
gagggcttggaatgtcatgtcttcattggaggaacacctttaaaccaagataaaatgaga
ctaaaaaagtgtcacatagctgtaggttctccaggtcgaataaagcaactcatagagttg
gactgtttgaatacagcaagtatccgcctattcattcttgatgaagcggacaagcttctg
gaagaaggcagttttcaggaacaagtcaactggatttattcttctttgccagccaacaag
cagatgttggctgtttctgctacctaccctgaaacattggctaaagctttgaccagatat
atgagagaccctacctttgtgaggttaaaccctatggacccaagtctgatagggctgaag
cagtattacaaaatagtgaattctcattcacttcctcataagacttttgaggagaaggcg
cagcacttgcaggatctcttcaggaggattccatttaatcaggccttggtcttctcaaat
ttgcatagcagggctcagcacctggctgaaatactgacatctaaaggttttcctgctgag
tgcatttcaggaagtatgaatcagaaccagcgtcttgatgcaatggctaagctgaagcag
ttccattgtagagtcctcatttccacagacttgacatctcgtggaattgatgctgagaag
gtgaatcttgtcatcaatctggatgtgcctttgcactgggaaacatacatgcatcggatt
ggtagagctggacgctttggaaccttaggcctcgctgtaacatactgttgccgtggggag
gaagagaatatgatgatgaaaattgcacagaaatgtaatctccagcttcttcctttacca
gagcctgtacccactggattgatggagcaatttgcagaatgggatgtagaggtcacagct
gttaccgatgcagatgcttcagtgaacactcctgtcctgacccataaaaaaccagcggag
ctagtgcaacacacaagcataaatagcggtgcccttgtgcctcgctgtgatcctgcaagt
gaaaattcttccatgtccaagctaagaagagttttcaagcaaaagcagctactgaagggc
agcaaagatcatgcaaatgcaggaaaaactagcaagagtccaaagacattcaacttcagc
ttgcagcagcaaaatcaaatggcagcaacctgcaaaatgactgaacaaaatgttgatcag
catctggataaagaaaccttaaaaaatacactccccaaaattccttgcctgtcatcgttt
aaaaaccaaccggtagcccttccctggagctttgcagagtttgttgaagactatgaatac
ttcattaaagaagggttagagaaaagggttgaaattgtaagaagctacacaggccctgga
gagcagtaccagcaccctaaaaatggtgcttttgaaaagaaagggatagaagagattatg
ccatcagtagcagacaatgcttcatttgaggacacggatagtgatagtaactcatacagt
tccggagcttccgctcatagtaggggaaacaagtcatacttggaagcctcttcagatact
caagagagaagtgatatactcattatggatcaggcttctcagaactattctcaaagcatg
agctgctccctgagcccagaggagcatcaacagaagacacaaatcgaaaatcacaggcag
atggaaaagaaattggtgaaacaaaattccaaatggtttaagaaaagccaccaccagcag
ttcctcagtccttcaaagagagaagcccaggaagactgttcatacagccctcaggatggg
agcactcctggctttccctgtgagactcaggcttacgaagattactggaaatcctattac
cgagcgtggcagagttgttatgcttctcactcttaccataggaaatttcattggcatttt
aactggatggctgcttatcatgctaactctgtctatcttgaagaactgctgaagactgac
tag
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