Carettochelys insculpta (pitted-shelled turtle): 142002566
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Entry
142002566 CDS
T11194
Symbol
MED1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142002566 (MED1)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
142002566 (MED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
142002566
NCBI-ProteinID:
XP_074834859
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All DBs
Position
28:complement(3510355..3534969)
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AA seq
1578 aa
AA seq
DB search
MKAAQGSAEEMEKLNKMSSLLERLHAKFNQNRPWTETVKLVRQVMEKRVVMNSGGHQHLV
SCLETLQKALKVSSLPAMTDRLESIARQNGLGSHLSANGTECYITSDMFYVEVQLDPTGL
LCDVKVAHHGENPVSCPELVQQLREKNFDEFSKHLKGLVNLYKLPGDNKLKTKMYLALQS
LELDLSKMAVMYWQATNASPLDKILHGSVGYLTPRSGGHLMNLKYYISPYDLFEEGTGAP
IVLHENNVPRSLGMNASVTIEGTLAMYKLPIAPLIMGSHPVDSKGTPSFSSVTSANSVDL
PACFFLKFPRPIPVSRAFIQKLQNCTGIPLFDTPPTFVPLYELITQFELSKEADPVPLNH
NMRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLISKITFQHPGRVPLILNLIRHQVAYNT
LIGSCVKRTVLKEDSPGILQFEVCPLSDSCFSVSFQHPVNDSLVCVVMDVQDSTHVNCKL
YKGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKN
LPPASSPGYGMTTGNNPMSGTTTPTNTFPGGPITTLFNMSMSMKERHDSVGHGEDFSKVS
QNPILTSLLQITGNVGSTIGSSPTPPHHTPPPVSSPASNTKNHPMLMNLLKDNPPQDFST
LYGSSPLERQNSSSGSPRMEMGPGGNKQKKKKSRTPADKPKHQTEDDFQRELFSMDVDSQ
NPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQTIPHPQPSIQRMVRLSSSDSIGADVT
DILSDIAEEAAKLPSTSEDCPAIGTPVRDSSSSGHSQSALFDPDVFQTNSSENPYTDPAD
LIADATVSPNSDSSNHFFPDGVDFNPDLLNSQSQSGFGEEYFDESSQSEGAEDFKGFASQ
ALTSLGVQVLGSDGGENKFKGSTQADMVDFSIIAAASKTLGSSDIMEHHSGSQSPLLSTG
DLGKEKSQKRVKEGNGSGSSLSGAGLDGKPGKRSRTPSNDGKSKEKLPKRKKADIEGKSP
SHSSSNRPFTPPASTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVTVGKPSHSQY
TSSGSVSSSSSKSHHSHSTSSSSSSSASSKVKSSKSEGSSGSKMSSNLYLSQGGSGSGQS
KSSAQSVGKPGSSPITKHGLSSSSGGNKMKPQGKPSSLMNPSMSKPNISPSHSRPSGGSD
KLASPMKPVPGTPPSSKAKSPISSGSGSSHMSGTGSSSNMKSSSGMGSSGSMSQKPPPSS
NSSTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLIAVIDKLKHGVVTSGPGGED
PMDGQMGPSSNSSSHSLSSKHNMSGGEFQGKREKSDKDKSKASGGSIDSSKKTTDSKNIG
STGVAKIIISKHDGGSPSIKAKVTLQKPGEGGGDSLRPQMASSKSYGSPLISGSTPKHER
CSPSHSKSPAYTPQNIDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSSEKHKKHKKEKK
KVKDKDRDRDRDRDKDRDKKKSHSIKPESWSKSPISSDQSLSMTSSAILSADRPSRPSPD
FLIGEEDDDLMDVALIGN
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggcgcaggggagcgccgaggaaatggagaagctgaataagatgagttctctc
ttggaaagactacatgcaaagtttaaccagaacagaccttggactgaaacagtgaagctt
gtccgtcaagtcatggaaaaacgggttgtgatgaattctgggggccatcaacatctggtg
agctgtttggagacactgcagaaagcattaaaagtatcatcgctgcctgccatgacagat
cgcctggagtctatagctagacaaaatggccttggatctcaccttagtgcaaatggcact
gaatgttacatcacttcagacatgttctatgtggaagtccagttagatcctacagggctg
ctgtgtgatgtcaaggtggcgcaccatggagaaaatcctgtgagctgcccagaactggtg
caacagctgagagagaaaaactttgatgaattttctaagcatctgaaggggcttgtaaac
ctttataaacttcctggagacaacaaacttaaaactaaaatgtacttggctttgcagtct
ttggagctggatctctcaaagatggcagtgatgtactggcaagccaccaacgcaagtccc
ctcgacaagattctgcatggcagtgttgggtatctcaccccaagaagtggaggtcacctg
atgaatctcaagtattacatttcaccgtatgatttatttgaagaaggcactggagccccc
attgttttgcatgagaacaacgtccctcggtctttgggcatgaatgcatctgtaacaatt
gagggaaccttggctatgtacaaactcccaattgcaccattaattatgggatctcatcct
gttgacagcaaagggactccatccttctcatcagtcaccagtgccaacagtgttgatttg
ccagcttgcttcttcttgaaattcccacgacctattccagtatcccgggctttcattcag
aaactgcagaactgcacaggaatcccattgtttgacaccccgccaacatttgtcccttta
tatgaactgatcacacagtttgagttatccaaggaggctgatcctgtacctttaaaccac
aacatgcgattctatgcagctcttccaggacagcagcactgctatttcctgaacaaggat
gctcctcttccagatggaagaagcctgcaaggaactctcattagtaaaatcaccttccag
caccctggccgggtccctctcatcctcaacttgatcaggcatcaggtggcctacaacaca
ttgattggcagttgtgtcaaacggactgttttaaaagaagattctcctgggatcctacaa
tttgaagtttgtcccctctccgattcctgtttcagtgtatcctttcagcatcctgtgaat
gattccctggtgtgtgtggtcatggatgtgcaggactccacacatgtgaactgtaaacta
tataaagggctctctgatgctctcatttgtacagatgacttcattgccaaagttgttcag
agatgtatgtccattccggtgactatgagagccattcgtcgaaaggcagagaccattcag
gcagacacgccagccctgtccctaattgcagagactgtagaagacatggtgaagaaaaat
ctgccccccgccagcagcccagggtacggcatgaccacaggcaacaaccccatgagtggt
accactacaccaacaaacacttttcctggggggcccatcactaccctgtttaacatgagc
atgagcatgaaagagaggcatgactcggtgggccatggggaggacttcagcaaagtgtct
cagaaccctattctcactagtttgttgcagatcacagggaatgtgggctctaccataggc
tcaagtccaacccctccccatcacacgcctccaccagtatcctcaccagcaagcaatacc
aagaaccacccgatgctcatgaacctccttaaagacaatcctcctcaggacttctccact
ctgtatgggagcagccctcttgaaaggcagaattcttcttctggctcccctagaatggaa
atgggcccaggggggaacaagcaaaagaaaaaaaaatctcgtacaccagcagacaagccc
aagcatcaaactgaggatgactttcagagagagctgttttcaatggatgttgattcccag
aaccctatttttgatgtcaacatgactgctgatactctggacacccctcacattacccca
gctcccagtcagtgcagcactcctcctactacgtacccccaaactatacctcaccctcag
cccagtattcagaggatggttcgactttccagttcagacagcattggtgcggatgtaact
gacatcctttctgatatagcagaggaggctgccaagctccccagcactagtgaggactgc
ccagccattggtactcctgtaagggactcttctagttcaggacattcacaaagtgccctc
tttgacccagatgtctttcagacaaatagcagcgagaacccatacactgatccagctgac
cttatagcagacgctactgtgagcccaaacagtgactcttcaaatcattttttccctgat
ggagtagatttcaatcctgatttactgaacagccagagtcaaagtgggtttggggaagag
tactttgatgagagcagtcagagtgaaggtgctgaggatttcaagggctttgcatcccag
gcgctaactagtttgggagtgcaagtcttggggagtgatgggggagaaaacaaatttaaa
ggaagcactcaggcagacatggttgacttcagtattattgcagctgcaagcaaaaccttg
gggtcctctgacattatggagcatcacagtggaagccagagtcctttactaagtacaggg
gatttgggaaaggagaagtctcagaaacgggtaaaagaaggcaatggctctgggagtagt
ttatcaggtgctgggctagatggcaagccaggaaaacgcagccggacaccatccaatgat
ggtaaaagtaaagaaaagcttccaaagcgtaagaaagcggacatagaagggaaatctccc
tcccatagttcatctaacagacctttcaccccaccagcaagcaccggtgggtcaaaatct
cctggaagttcaggcagatctcagactcctcctggtgtagcaactccacctattccaaaa
atcacaattcagatccccaaagggacagtgactgttggcaaaccttcacacagccagtat
acaagtagtggctctgtctcctcctcgagcagcaaaagccatcacagccattccacttcc
tcctcttcgtcctcttctgcctcgagcaaagtaaaaagcagcaaatcagaaggatcttct
ggctcaaagatgagcagcaacctgtatctgagccaggggggctcgggttcaggccagtca
aaaagctcggctcagtctgtgggaaagcctggatcctcccctatcaccaaacatggcctc
agcagcagttctggaggtaacaagatgaaacctcaagggaagccttcatcacttatgaac
ccttccatgagtaaaccaaacatttcaccttcccattctagaccatcagggggttctgac
aagcttgcctctccaatgaaacctgttccaggtactcccccatcatctaaagcaaaatcg
cctatcagttcaggttctggaagctctcatatgtctgggactgggtcaagctcaaatatg
aagtcctcctcaggaatgggatcctctggatccatgtcccagaaaccacctccttcatca
aactcttctacagcatcttcatcttccttttcatcgagtggttcttccatgtcttcatct
cagaaccagcatggaagctccaaaggcaaatctccaagcagaaacaaaaagccatccttg
attgcagtcatagacaaacttaaacatggggttgttactagtgggcctggaggtgaagac
ccaatggatggacagatggggccaagttccaattcctcaagccattctttatcctccaaa
cacaacatgtctggaggcgagtttcaggggaagcgggaaaagagtgacaaggacaaatct
aaagcttcaggaggatccattgactcttccaagaagactacggattccaaaaacattggt
agtactggagtggctaagattatcatcagcaaacatgatgggggctcccctagcattaaa
gccaaagtaactttgcagaaaccaggggaaggaggtggggatagcttaaggcctcagatg
gcttcttccaaaagctatggatccccactgatcagtgggtctactccaaagcatgaacgt
tgttcaccgagccacagtaagtcgccagcatacactcctcaaaacatagacagtgagagt
gagtctggctcctctatagcagagaaatcctatcagaacagtcccagctctgatgacggc
attaggccacttccggaatatagctcagaaaagcataagaaacacaaaaaagagaagaag
aaagtgaaagacaaagaccgtgacagagatcgggaccgtgacaaggaccgggacaaaaag
aagtcacacagcattaaaccagaaagttggtctaaatcgcctatttcttctgaccagtct
ctgtccatgacaagcagtgctatcctatcagctgacagaccatcccggccaagccctgat
tttttaattggggaagaagatgatgacctcatggatgttgctctgattggcaattaa
DBGET
integrated database retrieval system
