Carettochelys insculpta (pitted-shelled turtle): 142002727
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Entry
142002727 CDS
T11194
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03013
Nucleocytoplasmic transport
ciz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142002727 (CASC3)
03015 mRNA surveillance pathway
142002727 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142002727 (CASC3)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142002727 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
142002727
NCBI-ProteinID:
XP_074835158
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All DBs
Position
28:4359719..4377607
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AA seq
707 aa
AA seq
DB search
MADRRRQRASQDSEDESDSAASDSADSAAGGARSGSPPRPARGATGVLPAAGRGRGAESA
AGAAKSPPESECESEDGIEGDAVLSDYESAEDSEAEEGEYSEEESPKVDLKQESTHTSEA
TGKAEKGEEKPDSKGAVTGERQSGDGQESTEPTENKVGKKVPKHLDDDEDRKNPAYIPRK
GLFFEHDLRGQAQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIR
SAHNPDDIKPRRMRKPRFGSPPQREASWATERQNKPPRHQDSDAAPLPARTFTSRNAAGT
GRMPPARSFPRLGGYKENRPSYRSVDANSQHLSRTAEQVKSESSYRARRVEQAPERDPSP
EAEVTPVHSSPVKKEEVILESQTPSTDSVQPPPDRPIEKKSYSRARRTRNKAGDAGKLAD
EVPPPEGLTPVPPAPVQVVTPPPPAKAGSWETPVEPSMDRLEQDMTQLNLTEQNWTQGQP
PFIQPRELRGIPNMHMGAGPQPQFNRMEEMGVQGGRAKRYSSQRQRPPVPEPAPPMHISI
MEGHYYDPLQFQGPIYTHSETAAPLPPQGMIVQPEIHLPHPGLHPHQTPAPLANPGLYPP
PVSMPPGQPPPQQLLTPTYFSPPGVMNFGNPSYPYPPGALPPPPPPHLYSNTQAQSQVYG
GVTYYNTVQQQVQPKPSPPRRTSHPVTIKPPPPEDSASEKSKERSNT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggcggcggcagcgggcctcgcaggacagcgaggacgagtccgactcggcc
gcctcggacagcgccgactccgcggccggcggggcccgctccggctcgcccccgaggccg
gctcggggcgccaccggggtcctgcccgccgcgggccggggccgcggggccgagagcgcg
gccggggccgccaagagcccgccggagtccgagtgtgaaagtgaagatggcatcgaagga
gatgctgttctctcggattacgaaagtgcagaagactccgaggcggaggagggggagtac
agtgaggaggaaagccccaaggtggacctgaagcaggagagcacccacactagcgaagcc
acaggaaaagcagagaagggggaggagaaacctgactccaaaggtgctgtgactggcgag
agacaaagcggggatgggcaggagagcactgaaccaacggagaataaagttgggaagaag
gtccccaagcacttggatgatgatgaggatcggaagaatcctgcttacatccctcgcaaa
gggctcttctttgagcatgatctccgaggacaggcccaggaggaggaagtcaggcccaag
gggcgccagcggaagctctggaaagatgagggccgctgggagcacgacaagttccgggaa
gacgagcaagcccccaaaagcaggcaggagctgattgcgctctacggttatgacatcagg
tcggctcacaatcccgatgacatcaagccaaggaggatgcgcaagccacggtttgggagt
cctccccagcgagaggccagctgggccactgagaggcaaaacaagccaccgagacaccag
gactctgatgctgctccgctgccagcgcgtaccttcaccagccggaacgctgcaggcaca
gggcggatgcccccagcccggagctttccacgattgggtggctacaaagagaaccgtcca
agctaccgatctgtggacgcaaatagccagcacctctctcgaacagcggagcaggtgaaa
tccgaaagcagttaccgggcaaggcgtgttgaacaagccccggagagagacccctctcct
gaagcggaggtcacgcctgtccacagcagccctgtcaagaaggaagaggttatcctggaa
agccagaccccgagtacagactctgtacagccaccgccagacagacccatcgagaagaaa
tcctactcccgggcaaggcggaccaggaataaagctggcgacgcagggaagctggcagac
gaagtgccacctccggaggggctgacgcctgtaccaccagcgccagtgcaggtagtgact
ccccctcctcccgcaaaggccggtagttgggagacgccagtggagcccagcatggacagg
cttgagcaagacatgactcagttgaatctaaccgagcagaactggacccaaggacagcct
ccattcatacagcctcgggagctccggggtattcctaatatgcacatgggagctggacca
caacctcagtttaacaggatggaggaaatgggggtccaggggggccgtgccaagcgatac
tcatctcagcgtcagcggccgccagttccagagcctgctccccctatgcacatcagcatt
atggaaggacactattacgatccattgcaattccagggaccaatctacacacacagcgag
actgctgccccattgcccccccagggtatgattgtacagccagaaatccacctcccacac
ccaggtttacatccccaccagacaccagcacctttggctaaccctggcttataccctcca
ccagtctccatgccgcctgggcaaccacccccgcagcagctgctcacgcccacctatttc
tctcctcctggagtcatgaattttgggaatcccagctacccctatccccctggagctctt
ccgcctccacctcctccccatctgtattccaacacacaggcccagtcccaggtgtacggt
ggagtcacctattacaacactgtgcagcagcaggtgcagccgaaaccttctccgccccga
agaacatcccacccggtgacgatcaagccaccacctccggaggacagcgccagtgaaaag
tccaaggaaaggagcaatacgtag
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