Carettochelys insculpta (pitted-shelled turtle): 142002772
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Entry
142002772 CDS
T11194
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142002772 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142002772 (SMARCD2)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142002772 (SMARCD2)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142002772 (SMARCD2)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
142002772 (SMARCD2)
PBAF complex
142002772 (SMARCD2)
GBAF(ncBAF) complex
142002772 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
142002772
NCBI-ProteinID:
XP_074835258
LinkDB
All DBs
Position
28:12958840..12991372
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AA seq
501 aa
AA seq
DB search
MSGRGAFPLSPLAPAPGVAPPPAPGPGLMRGPSTAAAGPAGYRPMGPAAAATYQRPGMPP
GSRMPIAGLQVGPPSGAPYGAASPMRPGMPQSIMEPFRKRLLAPQSQLPLASQRRGLKRR
KMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYI
SNTFTPGKEEGDGSERVASWELRVEGKLLEDTSKQKRKFSSFFKSLVIELDKELYGPDNH
LVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAS
IMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFSCIRMRFSEIPMKLAGLLQHPDPIIIN
HMISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESINQL
KTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVTGNPEEERRADFYQQPWAQEAVGRH
IFAKVQQRRQELEQVLGIRLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccgcggcgcgttcccgctcagccccctggcgcccgcccccggcgtcgcgccg
ccgcccgccccggggcccggcctcatgcggggcccgagcaccgccgccgcggggcccgcc
ggataccggcccatggggcccgccgccgccgccacctaccagcgtcctgggatgccaccg
gggagccggatgcccatagcagggctgcaggtgggacctccatcaggagctccatatgga
gcagcttctccaatgcggccgggaatgccacagtcgattatggaacccttcagaaagcgc
ctgcttgctccgcagtcgcagctgcccctggcaagccaaaggcgagggctgaagcggagg
aagatggcagacaaggtcctcccacagaggatccgggagctagtcccagaatcacaggcc
tacatggaccttcttgcctttgagcgcaagctggaccagaccattgccaggaagagaatg
gaaatccaggaggccatcaagaagcccctgacgcaaaagcggaagctgcggatttacatc
tccaacaccttcaccccgggcaaggaagagggggatggcagtgagcgtgtggcctcgtgg
gagctgcgcgtggaaggcaagctcctggaggacacgagtaaacagaagaggaagttctcc
tcctttttcaagagccttgtcatcgaactggacaaggagctctatgggccagacaaccac
ctggtggagtggcacaggatgcccacgactcaggagaccgatgggttccaggtcaagcgc
cctggcgatgtcaatgtgaagtgcaccctgttgctcatgctggaccaccagcctccgcag
tacaaactggaccctcgcctggctcgcctgctgggtgtgcacacccagactcgggccagc
atcatgcaggcgctgtggctctacatcaagcacaacaagctgcaggacagtcacgagaag
gagtatatcaactgcaaccgctacttccgccagatcttcagctgcattcgcatgcgattc
tcagagatccccatgaagctggcaggcctgctgcagcacccagatcccatcatcatcaac
cacatgatcagcgtggatcccaatgaccagaagaagacagcctgctacgacatcgatgtt
gaggtggatgatcccctgaaagctcagatgagcaatttcctggcttccaccaccaaccag
caggaaatcgcctccctggatgccaagatccatgagaccattgagtccatcaaccagctg
aagacacagcgagatttcatgctgagcttcagcaacaacccacaggacttcattcaggaa
tggatcaaatcccagaggagggacctcaagatcataacggacgtgactgggaaccccgag
gaggagagacgagccgacttctaccagcagccctgggcacaggaggctgtggggaggcac
atctttgccaaggtgcagcagcgcagacaggaactggaacaagtgcttgggattcgcctt
acctaa
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