Carettochelys insculpta (pitted-shelled turtle): 142004000
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Entry
142004000 CDS
T11194
Symbol
SLAMF1
Name
(RefSeq) signaling lymphocytic activation molecule
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ciz04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
142004000 (SLAMF1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142004000 (SLAMF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142004000 (SLAMF1)
04090 CD molecules [BR:
ciz04090
]
142004000 (SLAMF1)
Cell adhesion molecules [BR:
ciz04515
]
Immunoglobulin superfamily
SLAM/CD2 family
142004000 (SLAMF1)
CD molecules [BR:
ciz04090
]
Proteins
142004000 (SLAMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAZ1_cons
SLAM
TMEM154
PKD
Ig_3
Motif
Other DBs
NCBI-GeneID:
142004000
NCBI-ProteinID:
XP_074837520
LinkDB
All DBs
Position
30:complement(3056967..3074795)
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AA seq
334 aa
AA seq
DB search
MRREMDCSAYLFLVLFFCCAGGMGSEVTATVYGSLGNPTMLNITPEFQNLTTRYREAVWK
LGPAVQQKRGVLIRCTTDTCTNYMPQRVKFHSETFSLEILVTQRVDAEHYEYTVNKGHEE
VSLHFRVEVYEQVSVPRIQVVSRTPGNESCTVTLGCGVEHGDNVTYTWNCSEGRDSYNGS
FLHLSLTPEKSRFHCTCNTSNQVSWQVAHFISSVECGNTTDGLDEKFLVKCIVPVALVVL
ICAAGVVIFTLIHKADQKDHSQLEEEQEYRTIYSQVQKVEKQKSCCPLPTVESADWTTIY
MSATRLPPDPTRVRTGTQDPEVMTVYASVMPPMS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgagagatggactgcagtgcctacctttttctggtcctttttttttgctgtgct
gggggcatgggctctgaggtgaccgcaacagtctatggaagcctggggaatccaaccatg
ttgaatataacacctgaatttcagaatcttaccacacgatacagagaagctgtgtggaaa
ctaggtccagcggttcaacagaagaggggagttctcatcaggtgcactacagacacctgc
acaaactacatgccgcagcgggtcaagtttcattctgagaccttctccttggaaatactg
gtgacccagagagtggacgcagagcactatgaatacacagtgaacaagggccacgaggaa
gtttctctgcatttccgtgtggaagtgtatgagcaggtttccgtcccccgcatccaggtg
gtcagcaggaccccaggcaacgagagctgcaccgtgaccctgggctgcggggtggagcat
ggggacaatgtgacgtacacctggaactgcagcgagggcagagactcctacaatggcagc
ttcctgcacctttccctcacgccggagaagagccgcttccattgcacgtgcaacaccagc
aaccaagtcagctggcaagtcgcccacttcatctcctcagtggagtgtggcaacacgaca
gacggcttggatgagaagttcttggtaaaatgcatagtaccagtagcccttgtggttctg
atctgtgccgcaggagttgtcatattcaccctaatacacaaagccgaccaaaaagaccat
tctcagctggaggaggaacaggaatatcgtacaatttactcacaagtccagaaggtggag
aagcagaaaagctgttgccccctacccacggtggagagcgctgactggaccaccatctac
atgtctgccaccaggctgcctccagaccccactcgggtgaggaccgggacccaagaccca
gaggtgatgacagtctatgccagcgtgatgcccccgatgagctga
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