Carettochelys insculpta (pitted-shelled turtle): 142004633
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Entry
142004633 CDS
T11194
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
142004633 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ciz03036
]
142004633 (CHD8)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142004633 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
142004633
NCBI-ProteinID:
XP_074838350
LinkDB
All DBs
Position
32:complement(3005390..3045680)
Genome browser
AA seq
2420 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLAEEGFTQAPRDPIEEALGLSGALDPSQPTLAPAAEPVQPE
PLTGQPTLGSPQPEPPQPGLPQEQELLSQGNPFMGVSGASTPGASPSSAGGQQLPQATAP
LPAPKIVILKAPAGGSVTGAHVAQIQAQPQALGTANGGKVTFAKVLTGTPLRPGVSIVSS
NAVLAAKVAPAGGHATVHRLVQPGRPVKQLVLQPVKSPAGGPGAAGGAPLKPAVTLTSAP
AQGESKRITLVLQQPQGGSSPAGQRHVVLGNLPGKIVLQGNQLAALSQAKGVPGQPAKVV
TIQLQVQQPPGGQAGGPQKIQLLQQPPAAGASGQQPAVSVSSMQQAQVVGSPGQRLTVPL
KVVLQPQASSSQGGSPGLSVVKVLSSSEVAALSGHGLRGGSEETRKLEHQKKQEKANRIV
AEAIARARARGEQNIPRVLNEDELPSVRPEEEGERKRRRRGGGERGGPKEERTRKGRGQG
GSGKSKGRSKPSTITPVVGKKRKRTASSDNSDTEAMPAPSPRQEEESSIQKRRSNRQVKR
KKYTEDLDIKITDDEEDEELDVTGPVRSEQLPAPQPPAPEPEGETLPSMQFFVENPSEED
AAIVDKVLSMRVVKKELPSGQFTEAEEFFVKYKNYSYLHCEWATIAQLEKDKRIHQKLKR
FKTKMTQMRHFFHEDEEPFNPDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDST
WELKEDVDEGKVREFKRIQARHPELKRVARPQAISWKKLELSHEYKNHNQLREYQLEGVN
WLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIRGPFLVIAPLSTITNWEREFNT
WTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREI
EWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFP
SEAEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNVQKKY
YRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILAEFRDACPHSL
PHDLHLQAMVRSAGKLVLIDKLLPKLRVGGHKVLIFSQMVRCLDILEDYLIQRRYLYERI
DGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA
QARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGREGSIAGIQQFS
KKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVA
SENRTDIALDDPNFWQKWAKKADLDLDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEF
SDLESEDEERPRSRRHDRHHPLHHSYGRTDCFRVEKHLLVYGWGRWREILSHARFKRRLS
ERDVETICRAILVYCLLHYRGDENIKGFIWDLISPSENGKAKELQNHSGLSIPVPRGRKG
KKVKSQSTFDVHKAEWIRKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQ
AGKVLAGANASEIDIWFPLVEQLEVPTAWWDAEADKSLLIGVFKHGYEKYNTMRADPALC
FLEKAGRPDDKAIAAEHRLDVGEGADFDKDCEDPEYKPLSGPAKEQDEEGDPLMLLDEEI
SVVDGDEGQPPQPGHLFWPPGSALTARLRRLITAYQRSYKQEQLKMEAAERGDRRRRRCE
AACKLKELVRREKQQRWTRREQSDFYRVVSSFGVEYDPDALRFHWSRFRALARLDRKTDE
SLTKYFHGFVAMCRQVCRLPPAASDESPDPTLFIEPISEERASRTLYRVDLLRRLREQVL
CHPLLQERLALCQPPGPELPAWWECGRHDGELLQGAARHGLSQTDTTIMQDPDFSFLAAR
LSYLHSRAGTPQPPVGGAGAPAASPLLPVPEPPAPLLPALLPKPDSAEDSDSELDLGKLS
PSTSGSSSSCSEDSEDERGTTPCGGKLSEEEDESLLSLPTSQEGDFPQPTAPELLLQERQ
RAHEWPKDRVLINRIDLVCQAVLSGKWPAGQRSQEACGVQGEAASRLPRDYVSSPAPHTR
PQEEVPVPYTRLRHSPAEKEFTVQIKDEEGIKLTFQKHKLVPNGALHERPPGPKTTSKKL
VELELQCLEGLRGPEIDLEARIPVVHKMNGTLLVGEAAPRRADLEAWLQAHPDFAIDPRF
LAYMEDRRKQHKWHRCKKPGAVELSCLPGLERDSVASSSHNSKKGYVPDPTVSRLLPSPL
ESEGSRRAGVDLAKMVSLIGGAGRSQLGAPGPLSLHSPFQAGPAPGSSLPYMPFSTVASS
GSLLHPGLGRGSYTAGPPLHLGSQGHLQPEEEEEEEEEDDDEMDDLSQGYASSERDFSLL
DDPMMPANSDSSDGANEGGD
NT seq
7263 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccatcatggacctgtttgatgaccccaacctctttggcttggactctctg
gcggaggaaggcttcacccaggcgccgcgtgaccccattgaagaggctctgggattgtca
ggggcgctggacccctcccagccaacgctggcccctgctgcagaaccagtccagccagag
ccactgacaggacagcccactcttggttccccccagccggagcctccccagccagggcta
ccccaggagcaggagctgctgagccagggcaacccctttatgggggtgtctggtgccagc
acccctggggcatccccctcctctgccgggggacagcagctgcctcaggctacagccccc
ctgccagcccccaaaatcgttatcctgaaggccccggcggggggctcggtgacgggggct
catgtggctcagatacaagctcagccccaggcactggggacagccaacgggggcaaggtg
accttcgccaaggtgctgacaggcaccccgctgcgccctggtgtctccatagtctccagc
aatgctgtgctggccgcaaaggtggcccctgccggtggccatgccactgtgcaccgcctg
gtgcagcccggccggccagtcaagcagctggtgctgcagccggtgaagagtccagcaggg
ggtccaggggctgctggaggagctcccctgaagcctgcagtcaccttgacgtctgcccct
gctcagggcgagtcgaagcgcatcaccctggtgctccagcagccgcagggtgggagcagc
cctgccggacagcgccatgtggtgctgggaaatctgcctgggaagattgtgcttcagggt
aaccagctggcagcactgagccaggccaagggggtgccaggccaaccagccaaggtggtg
accatccagctgcaggtgcagcagcctccagggggacaggctggggggccacagaagatt
cagctgctgcagcagcccccggcagcaggagcctcggggcagcagcccgcggtgtcagtc
tcctccatgcagcaggcccaggtggtgggcagccctgggcagcggctgactgtgccactc
aaggtcgtgctgcagccccaagccagctcctcccagggtggctcgcctgggctctcagtg
gtgaaggtgctgagcagcagtgaggtggcagcactgtctggccatggcctgcggggtggc
tcggaggagacccgcaagctggagcaccagaagaagcaggagaaggcaaaccgcatcgtg
gcggaggccattgcccgggcgcgggcccgcggggagcagaacatcccccgtgtgctgaat
gaggatgagctgcccagtgtgcggcccgaggaggagggcgaacgcaagcggcgccgcaga
ggcgggggcgagcgcggggggcccaaggaggagaggacccgcaagggccggggccagggc
ggctctggcaagagcaaagggcgcagcaagcccagcaccatcacccctgtggtgggaaag
aagcggaagcggacggcctcctccgataactctgacaccgaggctatgccggctccgtcc
ccccgccaggaggaggagagcagcatccagaagcgtcgctccaaccggcaggtgaagcgg
aagaagtacaccgaggatctggacataaagatcacagacgacgaggaggatgaggagctg
gatgtgaccggaccggtgcggtccgagcagctgcctgcgccacagccgcccgcccctgag
ccggagggggagaccctgccttccatgcagttctttgtggagaaccccagcgaggaggat
gctgccatcgtagacaaggtgctgtccatgcgggtggtgaagaaggagctcccttcaggg
cagttcacggaagcggaggaattctttgtcaaatacaagaactactcttacctgcactgc
gaatgggccaccattgcccagctggagaaggacaagcgaatccaccagaagctcaagcgc
ttcaagaccaagatgacccagatgaggcatttctttcatgaggacgaggagccctttaac
cccgactatgtagaagttgaccggatcctggacgagtcccacagtgtcgacaaggacaat
ggagagccggtgatctattacctggtgaagtggtgctctctgccttacgaggacagcacc
tgggagctcaaggaggatgtggatgaggggaaggtccgtgagttcaaacgcatccaggcc
cggcacccagagctgaaacgggtggctcgcccccaggccatctcctggaagaaactggag
ctctcccacgagtacaagaaccacaatcagctgcgggagtaccagctggaaggggtcaat
tggctgctcttcaactggtacaacagacagaactgcatcctggcggacgagatggggctg
gggaagaccatccagtcgatcgccttcctgcaggaggtgtacaatgtgggtatccggggc
cccttcctggtgatcgcccccctctccaccatcaccaactgggaacgggagttcaacacg
tggaccgagatgaacaccatcgtctaccacggcagcctggcctcgcgccagatgatccag
cagtacgaaatgtactgcaaggactcccggggccggctcatccccggtgcctacaagttc
gacgcgctgatcaccacctttgagatgatcctgtcggactgccctgagttgcgggagatc
gagtggcgctgtgtcatcattgacgaggcgcaccgcctcaagaaccgcaactgcaagctg
ctcgacagcctcaagcacatggacctggagcacaaggtgctgctgacgggcacgccgctg
cagaacacggtggaggagctcttcagcctgctgcactttctggagccttcccagttcccc
tccgaggcggagttcctcaaggatttcggggacctcaagacagaggagcaggtgcagaag
ctccaggccatcctgaagcccatgatgttgcggcggctgaaggaggatgtggagaagaac
ctggcgcccaagcaggagaccattattgaggtggagctgaccaacgtgcagaagaagtac
taccgggccatcctggagaagaacttctcctttctgtccaagggcgctggccacaccaac
atgcccaacctgctcaacaccatgatggagctgcgcaaatgctgcaaccacccctatctt
atcaacggcgcagaggagaagatcctggcagagttccgggacgcctgcccgcactccctg
cctcacgacctgcacctgcaggccatggtgcgctcagccggcaagctggtactgatagac
aagctgctgcccaagctcagggtgggcgggcacaaggtgctgatcttctcccagatggtg
cgctgcctcgacatcctggaggactacctcatccagcggcggtacctgtacgagcggatc
gacggacgggtgcgggggaacctgcgccaggcggccattgaccgcttcagcaagcccgat
tcggaccgcttcgtcttcctgctctgcacacgggctggtggcctgggcatcaacctcacc
gccgccgacacctgtattatcttcgactctgactggaacccccagaatgacctccaggca
caggcacgctgccaccggattgggcagagcaaggcggtgaaggtctatcgactcatcacc
cgcaactcctacgagcgtgagatgttcgacaaggccagcctcaagctggggctagacaag
gccgtgctgcagtccatgagtgggcgcgagggcagcattgccgggatccagcagttctcc
aagaaggagattgaggacttgctgcgcaagggggcctacgcagccatcatggaggaggat
gatgagggctccaagttctgtgaggaggatattgaccagatcctgctgcgccgcacgacc
actatcaccatcgagagcgaggggaagggctccacattcgccaaggcgagctttgtggcc
tcggagaaccgcacggacatcgccctggatgaccccaacttctggcagaagtgggccaag
aaggcggacctggacctggacctgctcaacagcaagaacaacctggtgattgacacaccg
cgggtgcgcaagcagacccggcacttcagcaccctgaaggatgatgacctggtggagttc
tctgacctggagagtgaggatgaggagcggccacgctcccggcgccatgaccggcaccac
ccgctgcaccactcgtatgggcgcaccgactgcttccgtgtggagaagcacctgctggtc
tacggctggggccgctggcgtgagatcctgtcccacgcgcggttcaagcggcgcctgtcg
gagcgtgatgtggagaccatctgccgtgccatcttggtctactgcctgctgcactaccga
ggcgatgagaacatcaaaggcttcatctgggatctgatcagcccgtcggagaacggcaaa
gccaaggagctgcagaaccactctggcctgtccatacctgttccgcgggggcgcaagggc
aagaaggtgaagtcccagagcacctttgatgtccacaaggctgagtggatccgcaagtac
aaccctgacacgctcttccaggatgagagctacaagaagcacctcaagcaccagtgcaac
aaggtgctgctccgggtacggatgctctactacctgcgccaggaggtgatcggggaccag
gctggcaaggtgctggctggggccaatgccagtgagatcgacatctggttcccactggtg
gagcagctggaggtgcccacagcctggtgggacgcggaggctgacaagtccctgctcatt
ggggtcttcaagcacggctatgagaagtacaacaccatgcgagccgaccctgcgctctgc
tttctggagaaggcaggacgccctgatgacaaggccattgctgcggagcaccgcctggat
gtgggggagggggcggactttgacaaagactgtgaggaccctgaatacaaaccactgtct
gggccagccaaggagcaggatgaggagggtgaccccctgatgctgctggatgaggagatc
tcggtggtggatggagatgaaggtcagccacctcagcccgggcaccttttctggccaccg
ggctcagcgctcacagcccggctgcggcgcctcatcacagcctaccagcgcagctacaag
caggagcagctgaagatggaggcggcagagcggggtgaccggcgacgtcggcgctgtgag
gcagcctgcaagctcaaggagctggtgcgccgggagaagcagcagcgttggacacgtcgg
gaacagtcagatttctaccgtgtggtgtccagctttggggtggagtacgacccggatgcg
ctgcgctttcactggagccgcttccgtgcactggcccggctggaccgcaagacagatgag
agcctcaccaaatacttccatggattcgttgccatgtgccggcaggtgtgccggctgccc
ccggccgccagcgatgagtccccagatcccacactgttcattgagcccatctcagaggag
cgggcctccaggacgctgtaccgtgtggacctgctgcgccggctgcgggagcaggtcctg
tgccacccattgctgcaggagcgcctggccctgtgtcagcctccaggccccgagctgccc
gcctggtgggagtgtgggcggcatgatggggagctgctgcagggggcggcccgccacggg
ctgagccagaccgacaccaccatcatgcaggatccagacttctcctttctggctgcccgc
ctcagctacctgcacagccgggctgggacacctcagcctcctgtgggaggggctggggcc
ccggcagcctcccccctgctccctgtgcctgaaccaccagctccgctgctgcctgcgctg
ctccccaagcctgactcggctgaggactcggactcggagctcgacctggggaagctctct
ccctccacctccgggtcgtcgtcgtcctgctccgaggacagcgaagatgagcggggcacc
acgccctgtgggggaaagctgtccgaggaggaggacgagtccctactgtccctgcccacc
tcccaggagggtgactttccccagcccaccgccccagagctgctgctgcaggaacgacag
cgtgcccatgagtggcccaaggaccgagtgctcattaaccgcatcgacctggtgtgccag
gctgtgctgtccggcaagtggcccgcgggtcagcgcagccaagaggcttgtggggtgcag
ggggaggctgcttcccggctgcccagggactatgtcagctcgcctgccccccacacccgc
ccccaggaggaggtgccagtcccatacacccgtctgcgccacagcccggcagagaaggag
ttcactgtgcagattaaggacgaggagggcatcaagctgacgttccagaagcacaagctg
gtccctaatggtgctttgcacgagcggccgccaggccccaagacgaccagcaagaagctg
gtggagctggagctgcagtgcctggaggggctgcggggccctgaaatcgacctggaggca
cgtatcccagtggtgcacaagatgaacgggacgctgctggtgggagaggcagccccacgc
cgtgctgacctggaagcctggctgcaggcgcaccctgactttgccattgatcctcgtttt
ctggcttacatggaagatcgtcgcaagcagcacaagtggcaccggtgtaaaaaaccaggc
gcagtggagctgagctgcctgccggggctggagcgggactcagtggccagcagctcccac
aacagcaagaagggctacgtgcctgaccctacggtgagccggctcctgcccagtccatta
gagtctgaggggagccgccgggctggtgtggatctggccaagatggtatccctgataggt
ggggctgggcggagccagctgggggctccagggcccctgtccctgcacagccccttccaa
gctggtccagcccctggctcttccctgccctacatgcccttctctacagtcgcctcctct
ggctccctgctgcatccagggttgggccgtggtagctacaccgcagggccacccctgcac
ctgggctcccaagggcatctgcagcctgaggaggaggaggaggaggaggaggaagatgac
gatgagatggatgacttgtctcagggctatgccagttcagaacgggacttttccctgctg
gatgaccccatgatgccggccaactctgactccagcgatggtgctaacgagggaggtgac
tga
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integrated database retrieval system
