Carettochelys insculpta (pitted-shelled turtle): 142005253
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Entry
142005253 CDS
T11194
Symbol
PCDH8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142005253 (PCDH8)
Cell adhesion molecules [BR:
ciz04515
]
Cadherins
Protocadherins
142005253 (PCDH8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Sde0182_C
AFF4_CHD
Motif
Other DBs
NCBI-GeneID:
142005253
NCBI-ProteinID:
XP_074838952
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All DBs
Position
1:complement(68750569..68754986)
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AA seq
1007 aa
AA seq
DB search
MGPARAESRLCSPPRLFYLCGLLWVALGKTVRYRTYEEDPPGTVIGTLAEELHVKAPGEI
SFRLMEQFSNSSLVRVREGDGQLSIGEGGLDRERLCGQAPQCVLAFDVVSLRQEQYRLVH
VELEVRDINDNAPRFPQAHIPLEVSESAAPGTRLPLELALDPDVGSNGVQSFQLSRNSHF
GVEAQARADGGKSAALVLLQELDRERQAAYTLELVAQDGGSPARAGTATVSVRVLDANDN
SPAFPQGALTVELAEDAPRGSLLLDLDAADPDEGPNGEIVYGFGSQVPAEARRLFRLDPL
SGRLTLEGPVDYERQRTYELDVQAQDRGASPLAATCRVIVRLADVNDNAPGISIRPLSGA
PAGAGVAYVSEAAARDSFVALVSTSDRDSGPNGQVRCALYGHEHFALQRAYADSYVLVTA
APLDRERLAEYNLTLVAEDLGSPPFRTIRQYTVRVSDENDNAPLFAQPAYEVALLENNPP
GAYVATVLARDPDLGRNGKVLYRLLESQVLGAPLSTYVSVDPTTGAIYALRTFNYEILKQ
LDLRIQASDGGTPQLSSSTLVKVKVVDQNDNAPVITHPVLTNGSTDIGVSSKAPPDSLVA
QIKARDADDGVNAELTFSFMEEPQQQQPELFAINKKTGEIVLRGDLSEELGQVFKVILTI
TDNGRPPLATTATINFLVTATAPSSSYEIAKPSSWEGKVLEWDIPLIVIIILAGSCTLLL
VAIITIATTCNKHKKESEMKNSRPLAEQIDISHLEKGRQEDSSSRGNVFEVQSFPSKAAF
TSPAPSSPAEEVSSSETSTVNACPYEGQKRHRAEPYASPPNYSKESAPPVAIWKGHSFGT
ISAREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDR
CWSPSCGRSNPHSSPHPSAQLSTFCKSTSLPRDPLHRDNYYQAQLPKTVGLQSVYEKVLH
RDFDRTITLLSTSRPGRLPELQEISIPLYQAPSTKYLAPQADTAEKV
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccgctagggcagagagccggctctgctctccgccgcgcctgttctacctctgc
gggctgctctgggtcgccctcggcaagacggtcaggtaccgcacgtacgaggaggacccg
ccgggcacggtcatcggcaccctggccgaagagctgcacgtgaaagcgcccggcgagatc
agcttccgtctgatggagcagttcagcaacagctcgctggtgcgggtgcgggagggcgac
gggcagctgagcatcggcgagggggggctggaccgggagcggctgtgcggccaggccccg
cagtgcgtgctggctttcgacgtggtgagcctgcggcaggagcagtaccggctggtgcac
gtggagctggaggtgcgggacatcaacgacaacgcgccgcgcttcccccaggcgcacatc
ccgctcgaggtgtccgagagcgccgcgcccggcacccgcctcccgctggagctcgccctg
gacccggacgtgggctccaacggcgtccagagcttccagctctcgcgcaacagccacttc
ggcgtggaggcgcaggcgcgggcggacggcgggaagagcgccgcgctggtgctgctgcag
gagctggaccgcgagcgccaggccgcctacacgctggagctggtggcccaggacggtggc
agcccggcccgcgcgggcacggccacggtgagcgtgcgcgtgctggacgccaacgacaac
agcccggccttcccgcagggcgcgctcacggtggagctggccgaggacgcgccgcgcggc
tcgctgctgctggacctggacgcggccgaccccgacgaggggcccaacggcgagatcgtc
tacggcttcggcagccaggtgccggccgaggcgcggcggctcttccggctggacccgctc
tcgggccgcctcacgctggagggcccggtggactacgagcggcagcggacctacgagctg
gacgtgcaggcgcaggaccgcggcgccagcccgctggcggccacgtgccgagtcatcgtg
cgcctcgccgacgtgaatgacaacgcgccgggcatcagcatccgcccgctgagcggcgcg
cccgccggcgccggggtggcctacgtcagcgaggcggcggcgcgcgacagcttcgtggcg
ctggtcagcacctcggacagggactcgggccccaacgggcaggtgcgctgcgccctctac
gggcacgagcacttcgcgctgcagcgcgcctacgccgacagctacgtgctcgtcaccgcc
gcgccgctggaccgcgagcgcctggccgagtacaacctgacgctggtggccgaggacctg
ggctcgccgcccttccgcaccatccggcagtacacggtgcgcgtgagcgacgagaacgac
aacgcgccgctcttcgcccagcccgcctacgaggtggcgctgctggagaacaacccgccg
ggcgcctacgtcgccaccgtgctggcccgggaccccgacctgggccgcaacgggaaggtc
ctgtaccgcctgctggagagccaggtcctgggcgcccccctttccacctacgtctccgtg
gacccgaccaccggggccatctacgccctcaggacattcaactacgagatcctcaagcag
ctggacttaaggatccaggcgagcgacgggggcacaccacagctgtccagcagcaccctg
gtcaaagtgaaggtggtggaccagaatgataatgccccagttatcacccacccggtgctc
accaacgggtccactgacatcggggtctccagcaaggctccccccgattctctagtggct
cagatcaaagccagagatgcggacgatggggtcaatgccgagctcaccttctctttcatg
gaggagccacagcagcagcagccagagctctttgccatcaataagaagacaggtgagatt
gtcctcaggggggacctgtccgaagagctggggcaggtgttcaaagtcatcctcactatt
accgacaatggcagacctccccttgctaccacagccacaatcaacttcctggtgactgcc
acagcaccctccagcagctacgagatagccaagcccagctcctgggaggggaaggttttg
gagtgggacattccactgattgtgatcatcatcctagctgggagctgcaccttgctgctg
gtggccatcatcaccattgcaaccacctgcaacaagcacaagaaggagtccgagatgaaa
aacagcaggcccctggcagaacagatcgacatctcccacttagagaaagggaggcaggaa
gatagcagctccagagggaatgtgtttgaagtgcaatcctttcccagcaaagctgctttc
accagcccagccccttcttcacctgcagaagaggtctcttcttctgagaccagtacggtg
aatgcctgtccctatgagggtcagaaacgacatagggcagagccctatgcttctcctcca
aattatagcaaagaatctgctccccctgtggccatctggaagggtcattctttcggcacc
atatcagcccgagaagcggaaaagttcagtggcaaagacagtggcaaaggcgacagcgac
tttaatgacagtgactctgacatcagtggggatgccctgaagaaggatctcattactcac
atgcagaatggattatgggcttgtactgctgaatgtaaaatcctgggccattcggatcgc
tgctggagcccctcctgtggccgatccaaccctcactcatctcctcatccatcagctcag
ctgtccaccttctgcaaaagcacatccttgcccagggatccccttcacagggacaactac
taccaagctcagctgcccaagacagtgggactgcagagtgtctacgagaaagtgttacac
agagactttgacaggacaatcacactgctatccacttctcgccctgggaggcttccagag
cttcaggagatcagcattcccctctatcaagccccctcaactaagtacctggccccacaa
gctgacacagctgagaaggtttaa
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