Carettochelys insculpta (pitted-shelled turtle): 142007996
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Entry
142007996 CDS
T11194
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ciz04131
]
142007996 (VPS50)
Membrane trafficking [BR:
ciz04131
]
Protein recycling
Others
EARP complex
142007996 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
142007996
NCBI-ProteinID:
XP_074840835
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All DBs
Position
2:complement(233839809..234024085)
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AA seq
969 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQENIHDLSPVENFRIPSKEELRELREQPTDPQVQQEIINSIEEV
YFSNDCFDIVKYELEKLPPVLSLQEVEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDARLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFAQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRMMEWHEKHDQDEGPASSSV
SVSDGGNVIGAEETNFDRSYIQKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFV
LDIISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVK
SSFSILQLHEFKFMEQSRSPSVSPSKQPASAISTTITLFEQYCKGGNPFEIQVNGKDDET
EDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRS
DYSLSKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFG
RNDAFESTGLGLSSSRLRTTLSRIQESLIDLEVSADTTGSLTAAEDRKEKVPSPHLSHLV
VLASGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAKKPFLQQFYSQTVSTASE
LRKPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSK
RVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIR
PIPDKEYVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAA
IDDIDRPKR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcgctgatgacccgtcagggtctcaaaagtccacaggagaacatt
catgacctcagccctgttgagaatttccggattcctagcaaggaggagctgagagaactc
cgtgaacaaccaaccgatcctcaagttcagcaagaaataattaacagcattgaagaagta
tatttttcaaatgattgctttgatattgtgaagtatgaattggagaagcttcctccagtg
cttagtcttcaagaagtggaagaatacagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgtgaaggaacttgag
cgagttacatctttacaaactggacttcagttagctgctgtcatttgcacaaatggaaga
agacacctgaatattgcaaaggaaggctttactcaagctagcttgggacttcttgcaaat
cagagaaaacgacagttgctgattggacttttaaagtctctgagaacaataaaaacgctg
caaagaactgatgcacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
caattgtgcttggaatgccagaaagcagccagtactttcaaacactacagttgtataagt
gaattgaattcaaaactgcaagacactttggaacaaatagaggaacagttagatgtagct
ctctccaaaatatgcaagaactttgatatcaatcattataccaaagtgcagcaggcttac
agacttcttggaaagacacagacagcaatggatcagctacatatgcacttcgctcaggcc
attcacaacactgtgtttcaagtcgttcttggatatgtagagttgtgtgcaggaaactcg
gacaccaaatttcagaagctacagtacaaagacctctgcacacacattacatcagacagc
tacataccatgtcttgctgacctctgtaaagcactttgggaagtcatgctcagctactat
cgaatgatggaatggcacgagaaacatgaccaagatgagggacccgcttcatcgtctgtt
tcagtttcagatggcggcaatgtgattggagccgaggagacgaattttgaccgtagttat
atacaaaagaaattagaacatggactttcacgaatatggcaggatgtgcagctgaaagtg
aaaacgtatctgctgggaaccgacatgtctaacttcaaatatgatgattttatctttgta
ctagatattattagcaggctcatgcaagttggcgaagaattttgtggcagtaagtcagaa
gttttgcaagagtctattagaaaacaaagtgttaattatttcaagaattatcacagaact
cgccttgaagaattacgaatgttcttggagaatgagacctgggagctttgtcccgttaag
tcaagctttagtattttacagcttcatgagtttaaattcatggagcagtcacgttcccca
tctgtgtcacctagtaagcagcctgcttcggcaatctcaaccaccataactttgtttgaa
cagtattgtaaaggaggaaatccatttgaaattcaggtcaacggcaaagatgatgagaca
gaagatgtacttgcttctaatgggtatgaatctgatgaacaggagaagagtgcctatcaa
gaatacgacagtgacagtgatgttcctgaggaactgaaaagagattacgtggatgagcag
acaggagatgcccctgtaaaaagtgtttctcgagaaaccctgaggagcagaaagcgatca
gattatagcctgagcaaggtgaatgcacctatcctaacaaacactacactgaatgtcata
agacttgttgggaaatacatgcagatgatgaacattctgaaaccaattgcatttgatgtg
attcacttcatgtcccagctgtttgattactatctttatgcagtgtacaccttctttggc
aggaatgatgcgtttgaatcaacagggctgggtcttagctctagcagactgcgcactacg
ctgagtaggatacaggagagcctgattgatctggaggtctctgctgataccactggctcc
ctcacagccgctgaagacagaaaggagaaagtgccaagcccacacctcagtcatctggta
gttttagcatcgggcaatactctgtatggtttggcggagagagtggtagccacggaatcc
ttggtatttttggctgagcagtttgagttccttcagtcacatcttgatgctgtgatgcct
gcagccaagaaaccctttctccagcaattctactctcagactgtgtcaactgccagtgaa
ctacgcaaaccaatttactggatcgtagctgctaaagctattgattatgaacagatgctg
cttctgatggctaatgtgaaatgggatgtgaaagagatcatgtcacaacacaatatatat
gttgatgctcttttaaaggaatttgaacagtttaacagaaggttgaatgaggtgtccaaa
agagtccgtattccattgccagtgtcaaatattctttgggagcattgtatacgactagcc
aatagaactattgtagaaggttatgcaaatgtcaagaagtgtagcaatgaagggcgtgcc
ctgatgcagctggacttccaacagtttttaatgaagctagaaaagctaacagacattagg
cccattccagataaggaatatgtggagacctacataaaagcttactacctgactgaaaat
gacatggagcgctggatcaaggagcaccgggaatattccaccaagcagttgactaatctg
gtgaatgtttgtctgggatcgcacatcaacaaaaaagcaagacagaaactgctagcagcc
attgatgacatagacagacctaagagataa
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