Carettochelys insculpta (pitted-shelled turtle): 142008359
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Entry
142008359 CDS
T11194
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
142008359 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ciz04131
]
142008359 (SPATA13)
Membrane trafficking [BR:
ciz04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
142008359 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
142008359
NCBI-ProteinID:
XP_074841642
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All DBs
Position
1:complement(47676876..47838845)
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AA seq
1267 aa
AA seq
DB search
MTTFQNGCGNGSTVTCIVMDNKELRSVKSNGACNSNNNAEEEIQGDKLSPSKVMRFFTTP
RKRTTSTSERPHSLIVMGSSSTWNALSSIRKMGSFRKLKSSVLQGIQTRESSDVLSENPM
GKHASNGAVVSVQTNRYSYSGPLHDFHNAVDGLASESSDIEESDDSFLRNTHRSRSIRRA
YGVGRINLLDTDKIQSQQNCTRPMSPNTQEPKFCEIVVKDSENNRIIYRRSKSTDSLNFL
KKSSFKRKSTSNLTDLKVANEKQVPIRTASSSADSDKANGNSERRSKRWKSPIRAKDFDR
VLKLVTNVTDVAWKKDGLMSQTLPLNEQNQGTRPNSRLHDDYSRRVSSSTENDRRRCNSP
SCSPDSNLSGPPRLHSLVSQDTDTESNVFSSEDNSVETLSCGLGAVSSSHAFNNLNALPN
KVFYVVSDEPKSNSQFTYEFEQPTIPLRPTAPKPQSPSAEKVKCNINFHCPDRHSTLSLS
SMESEERVELPAAKLGRNPVCFQDSVQTAYYDDGNEDSGISSHSQLSLNLASSVEEKKEE
VVIDDQWRMSPSQDEERTDTQKFASRRWGSGKRSRPRPLSDYGQLAIRSFSIPEDSVAVE
SQKTDCLDGGSHPGLVSAQSTAQSSTVGHQRGRKQRPISVIGGVSFYGNSRTEEIEDLLT
QPITRPPVPAHQVPPYKGVSARFRPFTFSQSTPIGLDRLGRRCQMRASNVVTDRGTESSA
LADDNGSEEDYSYEELCQDSPRYLQPGEEQLAINELISDGSMVYAEALWDHVTMDDQELG
FKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEELPENCGGMQDEEQHADAS
KHRQKIAENKDQMRTNVIQEIMNTEKVYIKHLKDICEGYIRQCRKHTGMFTVGQLNTIFG
NIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPSACIELSN
LMKHSKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTEEHSDYNNI
QAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGQDVLARSSELIHSGELTKISK
QGKSQQRIFFLFDHQLVFCKKDLLRRDMLYYKGRLDMDEVELVDIEDGKDKDFNINVKNA
FKTVNRATQEVHLFCAKKQEDKKKWLDACENERRRVQEDKEMGMEISENQKKQAMQNARK
SRHGKIKGISYNGCPMPPPHQSLHPIHQRHITVPTSIPQQQVFVLAEPKRKPSLFWHTFN
KLTPFKK
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttcagaatggctgtggaaatggttccactgttacctgtatagtaatggat
aacaaagaactaagaagtgtaaaaagcaatggggcatgcaatagcaacaataatgctgaa
gaggaaatacaaggtgataaactcagcccttcaaaagtcatgcgctttttcactacccct
cggaaacgaactacctccacctcagaaaggcctcattctctgattgtgatgggcagctca
tcaacatggaatgctttgtcttccattagaaaaatgggatctttcaggaaactaaaatct
tcagttcttcaaggaattcagaccagggaaagctcagatgtcttaagtgagaatcctatg
ggaaaacatgcctccaatggtgcagtggtgagtgttcagactaaccggtattcctattct
gggcctttacatgatttccataatgcagtggatggtttggcttctgagagctctgatata
gaagaaagtgatgactcctttctaaggaatactcaccgatcacgcagcattagacgtgct
tatggtgttggccgtataaatttattagacactgataaaattcagagtcagcagaactgc
accagaccaatgtctcctaacacccaggaaccaaaattctgtgaaattgtagtgaaagat
tctgaaaacaacaggattatctacaggagaagcaaaagcacggatagcttaaacttcctg
aaaaagagctcattcaaacgaaagtccacctcaaatctcactgacctcaaggttgcaaat
gaaaagcaagtgccaataaggacagcaagctcttctgctgactcagacaaagccaatgga
aattcagagagacggtcaaaacgctggaagagcccaatcagagcaaaggattttgacaga
gttttgaaacttgttaccaatgtcacagatgttgcatggaagaaagatggtctgatgagc
cagactttgcctctgaatgaacaaaaccagggaacaaggccaaacagcagactacatgat
gactattcacgcagggtttccagtagcactgaaaatgacagaaggcgatgcaattcccct
tcatgtagtccagattctaacttgtctgggcctccacgtctgcatagtttagtttctcag
gatacggacacagaatcaaatgtcttttctagtgaagacaacagcgtcgagacactatcc
tgtggcttaggtgctgttagttcatcacatgcttttaacaaccttaatgcacttcccaac
aaagtgttttacgtagtctctgatgaaccaaaaagtaacagccagtttacatatgaattt
gagcagcctaccattcctcttaggcccactgcccctaaacctcagagccccagtgctgag
aaggtcaagtgcaatattaattttcactgcccagatcgtcacagcacattgtcactgagc
tcaatggaaagtgaggaaagagttgagttacctgctgcaaagttggggagaaatcctgtt
tgcttccaggactctgtgcaaactgcgtactatgatgatggaaatgaagacagtggcata
agcagccactctcagttgagcctcaatttagcatctagtgttgaagaaaagaaggaagag
gttgttattgatgaccagtggaggatgtccccatcccaggatgaagaaaggacagataca
caaaagttcgcttcccggagatggggctctggaaaaagatctcggccaaggccactctca
gattatggtcagttggcaatcaggagtttctcaataccagaagattcagttgcagtggaa
tctcagaaaacagactgtttagatggtgggagtcatcctggattggtttctgcacagtct
acagcgcaaagcagtacagtaggtcaccaaagagggcgaaaacaaagacccatctctgta
ataggtggggtcagtttctatgggaacagccggacagaagaaatagaagatctactgaca
caaccaataacacgaccgcctgttccagcgcaccaagttcccccctataaaggtgtttca
gccaggttccgtcccttcaccttttcacaaagcactcccattggtctggatcgattggga
cgcaggtgtcaaatgagagcatctaatgttgttacagacaggggaactgaatcttctgcc
ttagctgatgacaatggtagtgaggaagattacagttatgaggaactctgccaagacagc
cctagatacctgcagcctggagaggaacagctagcaattaatgagctgataagtgatggc
agcatggtctatgcagaggcactgtgggaccacgtgactatggatgatcaagagctaggc
tttaaagctggggatgtcatcagagtccttgaagcttccaacaaggactggtggtgggga
agaaatgaagacaaggaagcctggtttcctgctagctttgtcaggctacgagttaatcag
gaagaactgccagaaaattgtggtggtatgcaggatgaagagcaacatgcagatgctagc
aaacatcgccaaaaaattgctgaaaacaaggatcagatgagaaccaatgttatacaggaa
ataatgaacactgagaaagtctacattaaacatctcaaagacatctgtgagggatatatt
cggcagtgtcgtaagcatacaggaatgttcaccgtgggtcagttaaacaccatttttgga
aacattgaagatatttacaaattccaaagaaagttcctgaaagatcttgagaaacaatac
aacaaagaggaacctcatttaagtgaaataggatcctgttttcttcaacatcaagaaggt
tttgccatctactcagagtattgtaacaatcatcccagtgcctgcattgagctttccaac
ctaatgaaacacagcaaataccgtcacttctttgaggcctgtcgcctgcttcagcagatg
attgacatcgctattgatggctttctccttacacctgttcagaagatctgtaaatatcct
cttcagcttgcagaattactcaaatacaccactgaagagcacagtgactataacaatata
caggcagcatatgaggccatgaagaatgtagcatgcctgattaatgagcgcaaacgaagg
ctggaaagcatagacaagattgcacgctggcaagtgtccattgttgactgggaggggcag
gatgttttagccagaagctcagaattgattcactcaggtgagctgaccaaaatctcaaag
caaggcaaaagccagcaaagaatttttttcctttttgaccatcagcttgtgttttgtaag
aaggacctgctgagaagggacatgttatactataagggtcggcttgatatggatgaggtg
gaacttgtggacattgaagatggcaaggataaggactttaacattaatgtcaagaacgct
ttcaaaactgtgaatagagcaacacaagaagttcatttgttttgtgcaaaaaaacaggag
gataagaaaaaatggttggatgcatgtgaaaatgaaaggaggagagtgcaggaagacaaa
gaaatgggaatggaaatctcagaaaatcaaaagaaacaagccatgcaaaatgccagaaag
tcaaggcatggaaaaattaaaggtataagttataatggctgtcctatgccccctccacac
cagagtttacatccaattcatcagcgccacatcactgtgcccaccagcattccacaacag
caggtctttgtcttggcagaacccaaacgaaagccatcccttttctggcataccttcaac
aaactcaccccattcaagaaatga
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