Carettochelys insculpta (pitted-shelled turtle): 142008365
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Entry
142008365 CDS
T11194
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142008365 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142008365 (EXOSC4)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
142008365 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
142008365 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
142008365
NCBI-ProteinID:
XP_074841648
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All DBs
Position
2:2046673..2049136
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRVDGRRAGELRKVRARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG
SRSKALHDRALVNCQYSMATFSTGERKRRPHGDRKSSEMTLHLKQTFEAAILTQLYPHSQ
IDIYVQILQADGGNYCACVNAATLATIDAGIPMRDYVCASSAGFIEDTPLTDLNYVEEAA
GGPQVALALLPKSDQIALLEMNSRLHEDHLEKVIEAASKACKDVYAVLDQVVRDHVQEVT
TLLGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggagctgctgtcggaccaggggtaccgcgtggacgggcgccgcgccggg
gagctgcgcaaggtgcgcgcgcgcatgggggtgttcgcccaggccgacggctccgcctac
atcgagcagggcaacacgaaggcgctggccgtggtgtacgggccgcacgagatgcgcggt
tcccgcagcaaggccctgcacgaccgggcactggtgaactgccagtacagcatggccacc
ttcagcacaggggagcgcaagcgccggccccatggggaccgcaagtccagcgagatgacg
ctgcacctgaagcagacctttgaggcagccatcctcacccagctctacccccactcccag
atcgacatctacgtgcagatcctgcaggcagatggtggaaattactgtgcatgtgtgaat
gcagccacgctggccaccatagatgcaggcatccccatgcgagactacgtgtgtgccagc
tctgccggcttcattgaggacacgccactcactgacctcaactacgtggaggaggcagct
gggggaccccaagtggccttggccttgctgcccaagtcagaccaaatagccttgctggag
atgaactcacggctacacgaggaccacctggagaaggtcattgaggctgccagcaaggct
tgcaaggatgtctatgctgtgctggaccaagtggtgcgtgaccatgtgcaggaggtcacc
acgctgctgggggagtga
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