KEGG   Carettochelys insculpta (pitted-shelled turtle): 142008379
Entry
142008379         CDS       T11194                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142008379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ciz04131]
    142008379
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ciz04147]
    142008379
Membrane trafficking [BR:ciz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    142008379
Exosome [BR:ciz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142008379
  Exosomal proteins of other body fluids (saliva and urine)
   142008379
  Exosomal proteins of colorectal cancer cells
   142008379
  Exosomal proteins of bladder cancer cells
   142008379
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 142008379
NCBI-ProteinID: XP_074841665
LinkDB
Position
2:3878737..3881903
AA seq 177 aa
MFRPSGHVLYCAPFPRLSTWSGTRLSLGNALCWGLYGACYPALSLPSLIVTLLLLQLDCP
LAMERIKEDRPITIKDDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRALMETM
NRMSHLPPDFEGRQKVNQWLQLLSCMSASDELDDSHVRQMLFDLESAYNAFNRFLYS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttcagaccatctggccacgttctgtactgtgctcccttcccccggcttagcacatgg
agcggaacccggctttccctgggaaatgctctttgttgggggttatatggtgcttgttac
cctgccctgagcttgcccagcctcattgtaaccctcctgctgctgcagctcgactgcccg
ctggccatggagaggatcaaggaggatcggccaatcaccatcaaggacgacaagggcaac
ctgaaccgctgcattgctgacatcgtctctcttttcatcacagtgatggacaagctgcgc
ctggagatccgagccatggatgagatccagccagacctgcgggcgctgatggagacgatg
aaccgcatgagccacctacctcctgacttcgaggggagacagaaagtgaaccagtggctg
cagctgctgagctgcatgtctgcctctgacgagctggacgattcccacgtgcgccagatg
ctgtttgatttggaatccgcctacaatgccttcaaccggttcctgtactcctga

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