KEGG   Carettochelys insculpta (pitted-shelled turtle): 142008380
Entry
142008380         CDS       T11194                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142008380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ciz04131]
    142008380
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ciz04147]
    142008380
Membrane trafficking [BR:ciz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    142008380
Exosome [BR:ciz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142008380
  Exosomal proteins of other body fluids (saliva and urine)
   142008380
  Exosomal proteins of colorectal cancer cells
   142008380
  Exosomal proteins of bladder cancer cells
   142008380
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 142008380
NCBI-ProteinID: XP_074841666
LinkDB
Position
2:4034804..4041689
AA seq 224 aa
MFHGIPAAPGPGAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDC
VSPNEYTAACSRLLVPYKAAFKQVQGSEIGSIDEFCRKFRMSSLDCPLAMERIKEDRPIT
IKDDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSHLPPDFEGR
QKVNQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFSRFLHS
NT seq 675 nt   +upstreamnt  +downstreamnt
atgttccacgggatccctgctgcgcctggcccaggagccccagggaataagccagaactg
tacgaggaggtgaagctgtataaaaatgcacgggagcgagaaaagtacgataacatggct
gagctgtttgcggtggtgaagacgatgcaggctctggagaaagcctatatcaaggactgt
gtctctcccaacgagtacaccgcagcctgctcccggctcctggtcccgtacaaagctgcc
ttcaaacaggtacagggatctgaaattggctccatcgatgaattttgccgcaagttccgg
atgagttcactcgactgcccgctggccatggagaggatcaaggaggatcggccaatcacc
atcaaggacgacaagggcaacctgaaccgctgcattgctgacatcgtctctcttttcatc
acagtgatggacaagctgcgcctggagatccgagccatggatgagatccagccagacctg
cgggagctgatggagacgatgaaccgcatgagccacctacctcctgacttcgaggggaga
cagaaagtgaaccagtggctgcagacgctgagcggcatgtctgcctctgacgagctggac
gattcccaagtgcgccagatgctgtttgatttggaatccgcctacaatgccttcagccgg
ttcctgcactcctga

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