Carettochelys insculpta (pitted-shelled turtle): 142008402
Help
Entry
142008402 CDS
T11194
Symbol
TOP1MT
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ciz03032
]
142008402 (TOP1MT)
Enzymes [BR:
ciz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
142008402 (TOP1MT)
DNA replication proteins [BR:
ciz03032
]
Eukaryotic type
DNA Topoisomerases
142008402 (TOP1MT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
142008402
NCBI-ProteinID:
XP_074841694
LinkDB
All DBs
Position
2:7944507..8015238
Genome browser
AA seq
1237 aa
AA seq
DB search
MTDNEEQASERDIGNRHETEKTASASVKTKNESNWKRKNVLEQKGQEKEKKPRPEALNRL
WEDAQRKDRPPPVKEKKRQSRAKEKPLQENIISRSSLKQEAAGKEPASHKLEDKLKAPKK
ETSAKQRQVQAESVPPRTPASGQEDRSRVLEVSAPDCKGQEVSPPGQQEGEEGQPRKGSA
ERLEHTPKNVKHGPEGKHPGCHDRDLVPGQEETTTNTVGGEHVVFSGEPEGSAEEMAITA
KEEQEKKATKRAQSSLIPEELRGQKQVKDRKRKRDEEVERGTRRQKETEPRRQEIKEKGG
GDRAERKGGVSQKEKPKKESAPTERKNREKIDGAEPSKAQRDTGKAEATSGKDEGPKEMG
RREGHPRWDRAKESKQMVGGDDAEGLAGDQREIEKKERETAGEVEDWAPPGEAGIQAEQG
VAKMRERGEEQPAELPAGTAEVEVKTGHKDTEREQKKGKGNKEGTAGKSPPERRREKKEE
KAKGERTRREEGQSSEEKTGKKRPPKKEKRGEEEQKVEEREGPGEMEARDDVGEEREKET
QKMKGEKEIKGEKEEAASQGGEGWGRNGSLGGGQEMEDSSFGEAKEAEPEGDMRGDSAEM
PGQEKKQAKKKPKERKAKGENKLTEGKGRKSKGNSQEAADEGAAVKRKSKGEGDEKATKK
LKKEEEEKKDEGNKWKWWEEEKMDDGVKWKQLEHKGPYFAPPYELLPDDIRFYYDGKPMK
LSVAAEEIATFYAKMLDHEYTTKEVFQNNFFHDWRKEMTSEEQKKIKHLEKCDFKEIHKY
FVDKNEARKALPKEEKQKLKEEADKIQEEYGYCILDGHREKIGNFKTEPPGLFRGRGDHP
KMGMLKKRIMPEDVIINCSKDSKIPEPPAGHKWKEVRCDNTVTWLASWTENIQNSIKYIM
LNPSSKLKGEKDWQKYEVARRLKDVVDKIRSQYRADWKSREMKKRQRSVALYFIDKLALR
AGNEKEEGETADTVGCCSLRIEHIKLHPELHGQQHVVEFDFLGKDSIRYYNKVPVEKPVF
KNLKLFMENKDPGDDLFDRLNTTLLNKHLQDLMDGLTAKVFRTYNASITLQEQLKALTNA
EDNVAAKLLSYNRANRAVAILCNHQRSTPKTFEKSMQNLQAKIEAKKEQLAEAQVELKRA
KADLKAKKDVKSKAAVEKKKKLLEKLEEQLLKLNVQATDKEENKQIALGTSKLNYLDPRI
SVAWCKKFGVPIEKIYNKTQREKFAWAIDMADEDFEF
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgactgataatgaagagcaggccagtgagagggacattgggaatcgtcatgaaacggag
aagacagcatctgcatcagtgaagactaagaacgagagtaactggaaaaggaagaatgtc
ttggagcagaaggggcaagaaaaggagaagaaaccgcgaccagaagctctgaacaggttg
tgggaggatgctcagcgaaaggaccggccccctccggtaaaagagaaaaagagacagtcg
agagccaaggagaagccattgcaagaaaacatcatcagcagaagctctctcaagcaagag
gctgctgggaaggaacctgccagccacaagttggaagacaaattgaaggctcccaagaag
gagacctcagccaagcagaggcaggtgcaggctgaatctgtcccacccagaactccagct
tccgggcaagaggatcgttccagagtccttgaggtgtctgcaccagattgcaagggccag
gaagtttctcccccaggacagcaggagggagaagagggacagcccaggaaggggagtgct
gaaaggctggagcacaccccaaagaatgtgaaacatggccctgaagggaaacacccgggg
tgccatgacagagacctggttccaggacaagaggagacaaccacgaacacggttggtggg
gagcacgtggtcttctctggagagccggaaggttccgctgaggaaatggccattaccgcc
aaagaggaacaagagaagaaggccaccaagagggcgcagagctccctcattcctgaggag
ctaagagggcagaaacaagtcaaggacaggaaaagaaaaagagatgaggaagtggagaga
gggaccaggaggcagaaggaaacggagccacggaggcaggagatcaaagagaagggggga
ggggaccgagcagagaggaaaggtggggtgagtcagaaagagaagcctaaaaaggagagt
gctcccacagagagaaagaaccgggagaaaatagatggtgcagaacccagcaaagcccag
agggacacgggaaaggctgaagccacttctggtaaggatgaagggccaaaggagatggga
aggcgagagggtcacccaagatgggacagagctaaggagtccaagcagatggtgggtggg
gatgatgcagaagggttggctggtgatcagagagaaatagaaaagaaagagagggagaca
gctggagaggtggaggactgggctcctccaggagaggctgggatacaggcagagcaaggc
gtggccaagatgagagagagaggagaagagcagcctgctgagttgccagcaggaacggcc
gaggttgaggtgaaaacaggccataaagacaccgagcgagagcaaaagaaaggcaagggg
aataaggaagggacagcaggaaagagcccgccagagagacggcgggaaaagaaggaggag
aaggcgaaaggtgagagaacgagaagggaagaaggtcagagcagcgaggagaagacggga
aagaagagaccaccgaagaaggagaaacggggggaagaggagcagaaagtggaggagcga
gagggacctggggagatggaagcaagagatgatgtgggggaagagagggaaaaagagact
caaaaaatgaagggtgagaaggaaattaagggtgagaaagaggaggcagctagtcaaggg
ggagaaggatggggaaggaatggaagcctcggtggtggacaggaaatggaggacagtagc
tttggagaggcaaaggaagctgagccagagggggatatgaggggggactcagcagagatg
ccaggccaggagaagaagcaggccaagaaaaaacccaaggagagaaaagcaaagggagaa
aataaactcacggaagggaagggcagaaaaagcaaagggaactcccaggaggcggcggat
gagggggcagctgtgaagcggaaaagcaaaggggaaggagacgaaaaggcaacaaagaaa
ttaaagaaggaagaggaggagaagaaggacgagggaaacaagtggaagtggtgggaagag
gagaagatggacgacggagtgaagtggaaacagctggagcacaaaggcccctacttcgcc
ccgccctacgagctgctccccgacgacatcaggttttactacgatggcaaacccatgaag
ctgagtgtggccgcggaggaaattgccaccttctatgcaaaaatgcttgatcatgaatat
accaccaaggaggttttccagaacaacttcttccacgactggagaaaggaaatgacttcg
gaggaacagaagaagataaagcacctagagaagtgcgacttcaaagagattcacaagtac
tttgtggacaagaacgaggcccgtaaagctttgcccaaggaggagaaacagaaactgaag
gaggaggctgataagatccaggaagaatatggctactgcatcctcgacgggcatcgggag
aaaatcggcaacttcaagactgagcccccggggctgttccgggggcgtggggaccacccg
aaaatgggcatgctgaagaagaggatcatgccagaggatgtcatcatcaactgcagcaag
gactctaaaatccccgagcccccagcgggtcacaagtggaaggaggtgcgatgtgacaac
accgtcacctggctggcttcgtggaccgagaacatccagaactcgattaagtacatcatg
ctgaaccctagttccaagcttaagggggagaaggactggcagaaatatgaggtagccaga
cgtttaaaggacgtagtggacaagatccgctctcagtaccgtgccgactggaaatccaga
gagatgaagaagcggcaaagatccgtggccctctacttcattgacaagctggccctgaga
gccgggaacgagaaggaggaaggggagacggcggacacggttggctgctgttccctgcgc
attgagcacattaagctgcacccagagctgcatgggcagcagcacgtggtggagtttgac
ttcctggggaaagactcaattcggtattacaacaaagtgcctgtggagaaaccggtgttc
aagaacttgaagctgtttatggagaacaaagacccaggggacgacctctttgacaggctg
aacacgactctcttgaacaagcaccttcaggatttgatggatgggctgacagccaaggtg
ttccgaacctacaacgcgtccatcacgctgcaggagcagctgaaagccctcacaaatgct
gaagacaacgttgcagcaaaactcctctcctataaccgagccaaccgagctgtggccatt
ttgtgtaaccatcagagatccacgcccaagacctttgagaagtcgatgcagaaccttcag
gccaagatcgaggccaagaaggagcagctggctgaggcacaggtggagctgaagagagcc
aaggctgatctcaaagccaaaaaagacgtgaaatcgaaggctgctgtggagaagaagaag
aagctgctggagaagctggaagaacagctgctgaagctgaacgttcaagccacggacaag
gaggaaaacaagcagattgctctgggcacgtccaagctgaattatctggatcccaggatc
agcgtggcctggtgtaagaagttcggcgtgcccatcgagaagatttacaacaagacccag
agggagaagtttgcgtgggccattgacatggccgacgaagactttgagttctga
DBGET
integrated database retrieval system
