Carettochelys insculpta (pitted-shelled turtle): 142008848
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Entry
142008848 CDS
T11194
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142008848 (NUP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142008848 (NUP42)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142008848 (NUP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_2
GEVED
STX6_10_61_N
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
142008848
NCBI-ProteinID:
XP_074842274
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All DBs
Position
2:complement(218630639..218652574)
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AA seq
418 aa
AA seq
DB search
MTICHYFLQGRCRFGERCWNEHPRGGGRSGQAAPPSQGTSRGGWGGHNQRYGVVQPSNFS
KPSTWGGSGSDGKAFFRPSVDYGAPGNKNVGFSQNRFSALSSEQNFGSGYRDEDEKLLEG
IIKDMEVWESSGQWMFSCYSPMKEKPNISGFPDFSPEELHLEYYNCRANNNIQNYINSVQ
QLVNQWQNRLRELKTLNASTKVSLLSELKNAVNQPSSAFGFGGQQPPTFGSSSFPISSNR
SASNFSFKTNTELVNASSGSTNTFGSPFTVPDTSALGMTSSSKSAHSIGFGSQPASCAAS
FSFKKPETTSGFGASGFTGFGSSSAVHSSTTTSYPAFGAVNAAVATPAPESGNSSFGQPA
SAFGYNATPPAATSCVTSDKLFTPKTELSAEDLRQFEAKKFSLGRIPLKPPPMELLNV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttgccactacttcttgcagggccgttgccgctttggcgagaggtgttggaac
gaacatccccgcggcggggggcgttcggggcaggccgcgccgccctcccagggtactagc
agaggaggatggggtggccataaccagagatatggtgttgtccaaccatctaatttctct
aaaccctctacatggggtggaagtggaagtgatggaaaggcatttttcagaccctccgtt
gactatggagcaccaggcaataaaaatgtgggattttctcaaaacagattctctgcgtta
agttctgagcaaaattttggcagtggctacagagacgaagatgagaaacttctcgaaggc
ataataaaggacatggaagtctgggaatcttcaggacaatggatgttttcctgttattca
cctatgaaagaaaaacctaacatctcaggttttccagacttctcaccagaagagttgcat
cttgaatactataactgcagagcaaacaataatattcagaactatataaattcagtccag
caattagtaaaccaatggcaaaataggttgcgtgaattgaagactctaaatgcatctacc
aaagtatcgttgctatctgagctgaaaaatgccgttaatcagccatcgtctgcttttgga
tttggtggacaacagcctccaacgtttggatcatcaagctttccaataagcagcaatagg
agtgccagcaatttctcctttaaaacaaatactgaacttgtcaatgcatcctctggaagc
accaatacatttggaagcccttttactgttccggatacttcagcattgggtatgacttcg
tcctcaaaatcagcccattccattggcttcggcagccagccagcttcatgtgcagcctct
ttttcatttaaaaagcctgaaacaacaagtggttttggggcttctggatttacaggattt
ggcagttcctctgctgtacactcttcaaccacaacctcatatccagcctttggagctgtt
aatgcagcagttgctactcctgccccagaatcaggcaattcttcatttggacaacctgct
agtgcctttggatataatgcaacacctcctgcagccacaagctgtgttacctctgataag
ttgttcacaccaaagactgaactatcagctgaggacttgaggcagtttgaagcaaagaaa
ttttcactgggaaggattcctctaaaaccaccaccaatggagcttttaaatgtttga
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