KEGG   Carettochelys insculpta (pitted-shelled turtle): 142009022
Entry
142009022         CDS       T11194                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142009022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ciz04131]
    142009022
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ciz04147]
    142009022
Membrane trafficking [BR:ciz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    142009022
Exosome [BR:ciz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142009022
  Exosomal proteins of other body fluids (saliva and urine)
   142009022
  Exosomal proteins of colorectal cancer cells
   142009022
  Exosomal proteins of bladder cancer cells
   142009022
SSDB
Motif
Pfam: VPS28 NEPRO_N
Other DBs
NCBI-GeneID: 142009022
NCBI-ProteinID: XP_074842569
LinkDB
Position
2:3232510..3235480
AA seq 177 aa
MFRPSGHVLYCTPFPQLSTWSGTRLSLGNALCWGLYGACYPALSLPSLIVTLLLLQLDCP
LAMERIKEDRPITIKDDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRQLMETM
NRMSHLPPDFEGRQKVNQCLQMLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttcagaccatctggccacgttctgtactgtactcccttcccccagcttagcacatgg
agcggaacccggctttccctgggaaatgctctttgttgggggttatatggtgcttgttac
cctgccctgagcttgcccagcctcattgtaaccctcctgctgctgcagctcgactgcccg
ctggccatggagaggatcaaggaggatcggccaatcaccatcaaggacgacaagggcaac
ctgaaccgctgcattgctgacatcgtctctcttttcatcacagtgatggacaagctgcgc
ctggagatccgagccatggatgagatccagccagacctgcggcagctgatggagacgatg
aaccgcatgagccacctacctcctgacttcgaggggagacagaaagtgaaccagtgcctg
cagatgctgagcggcatgtctgcctctgacgagctggacgattcccaagtgcgccagatg
ctgtttgatttggaatccgcctacaatgccttcaaccggttcctgcactcctga

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