Carettochelys insculpta (pitted-shelled turtle): 142009042
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Entry
142009042 CDS
T11194
Name
(RefSeq) tonsoku-like protein
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142009042
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142009042
Transcription factors [BR:
ciz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
142009042
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142009042
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
LRR_6
LRR_NLRC3
TPR_8
TPR_12
TPR_1
LRR_TMOD-LMOD
TPR_7
CFAP70_TPR_C
LRR_CARMIL
RPN7
TPR_2
LRR_MHP1-HER1-GIP3
TPR_14
Ank_KRIT1
ANAPC3
TPR_SusR
LAMTOR
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
142009042
NCBI-ProteinID:
XP_074842581
LinkDB
All DBs
Position
2:complement(4118411..4130495)
Genome browser
AA seq
1259 aa
AA seq
DB search
MFVAESGQAGEALWEAEQAFMKSLAILEEQLEGKVPQRELSEMRARLYLNLGLVYDSMKD
QARCSQYIKKSIFISEQTHLYEDLYRAYFNLGHIHLREGQHSKAMRCLERARDCAHTMKE
KCMESECCAGIAQVLLSLGDFVAARRSLKKAYVLGSQQPQQRESIRRNLRYAEGVSHLQE
ALEEAVPGDLQTALGLCEQLGDLFSKHGDYRRAVEFYQRQLRYAESLQKPEQELAVIHVS
LATTFADLREPGRAVQHYQTELALRRGNPLEEGKTWLNIALAREEAGEGYEALEPCFQSA
LRCAEQAGEPRLQRQILQHLHPLQQKWGRPEAPDTLARLQGLCRSQGWSSARDSRGEEEE
EEEEESSEPLEESDLELSESDGEEDDLDGYSKSVPGRRRIAKWNRRNDRGETPLHRACID
GNLRRVHFFLEQGHPLNPRDYCGWTPLHEVCNHGHLEIVRLLLERGASIDDPGGPGCEGI
TPLHDALNCGHFDVAELLLQRGASAVLRNAKGLSPLGTLREWVRMYGRDLDQETRQRCRA
MEQLLKEAVVGRSAEVAQPPQDVPHSQLFDAELSEPLTPPHSAVAPQPQSGGPSTKATAP
CRILTQRGGQGPECWAKLDECMTPLRPVKKRQRLLSLRAPGEESRVLGFLGRAEPGLPPA
GTGQAKYEAAIRGVGSAQSCQVPELVPAEASARPALIPAEEYVGDDWLEDDLGASREPRK
RSHRRPGESGSDSGGTSGSESDGAAPFPAALPQKRRARQSRLTQIVDRTSLARSRGGQAL
VAPEPAAGLRPVDGSGEAPQAPLLAAAPTRPPPIRVRVRVQDNIFLIPVPHSGLERCPVA
WLAEQAAQRHYQACGLLPQLTLKKEGALLAPQDLIVDVLQSNEEVLAEVQSWDLPPLADR
YRKACCSLAVGEHRLLLKMMELQESGPSFSTCGLSLHQPHLTPLLRALKLHSSIRQLRLA
GTGLDDGLAAELLATLGTMPSLALLDLSANQLGAEGLRALAAGLPSQAVFQSLEELDLSL
NPLGDKSCEALACLVRACPVLTTLRLQACGFSEAFGQHHRLLLANSLKGAVHLKTLALSH
NALGSSGLQLLLRSLPYATLSQLEIGSVVARLGEPLVDPVVRCLTQQGCALTHLALSGNH
LNDEAVAELARCLLVCPTLISLDLSANPEVTSGGFQMLLSALGERRQGLQYLSLAGCRVR
GPLDSTTWARVSANVRELRLCSRQLSGSNQRGVGESWLGPPGTSLSAVTQHHKLFCKSI
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtggcggagagcggccaggccggggaggcgctctgggaggcggagcaggccttc
atgaagagcctggccatcttggaggagcagctggaagggaaggtgccgcagcgggagctg
agtgagatgagggcccggctttacctcaacctgggcttggtgtacgacagcatgaaggac
caggccaggtgcagccagtacatcaagaagagcatcttcatctccgagcagactcacctc
tatgaagacctgtaccgggcctacttcaatctgggccacatccacctgcgggaggggcag
cactccaaggccatgcgctgcctggagcgggcgcgcgactgcgcccacaccatgaaggag
aagtgcatggagagtgagtgctgtgccggcatcgcccaggtgctcctcagcctgggggac
tttgtggccgccaggcgctcgctgaagaaggcctacgtgctgggctcccagcagccccag
cagcgcgagagcatccgcaggaacctgcgttacgctgagggggtcagccatctgcaggag
gctctggaggaggcagtgcccggcgacttgcagacagccctgggcctgtgtgagcagctg
ggggacctgttctccaagcatggggactatcgccgggcggtggagttctaccagaggcag
ctgcgctacgccgagtccctgcagaagcctgagcaggagctggctgtgatccacgtctct
ctggctaccacctttgcggacctgagggagcccggccgggcggtccagcactaccagacg
gagctggcgctgcggcgaggaaacccactggaggaggggaagacctggctgaacatcgcc
ctggccagggaggaggctggcgaaggctacgaggccctggagccctgctttcagagcgcg
ctccggtgcgcggagcaggctggggagcccaggctgcagcggcaaatcctacagcacctt
caccccctgcagcagaagtgggggcgccctgaggcccccgacacgctggccaggcttcag
ggcctgtgccgctcgcagggctggagcagcgccagggacagccggggggaggaggaggag
gaggaggaggaggagagcagcgagcccctggaggagagcgacctggagctgtctgagagc
gacggggaggaagatgacctggacggctacagcaagagcgtgcctggccgccgcaggatc
gccaagtggaaccggcgcaacgaccggggtgagaccccgctgcaccgcgcctgcatcgac
gggaacctgcgccgggtccatttcttcctggagcagggccaccccctgaacccgcgggat
tactgcggctggaccccgctgcatgaggtctgtaaccacgggcacctggagatcgtgcgg
ctgctgctggagcgtggtgcctccatcgatgaccccgggggcccaggctgcgaggggatc
acccccctgcacgacgctctcaattgcggccacttcgacgtggccgagctgctgctccag
aggggcgcgtcggcggtgctgaggaacgccaagggcctgagccctctgggcaccctccgg
gagtgggtgaggatgtacggccgggacctggaccaggagacacgccagcgctgccgagcc
atggagcagctgctcaaggaggcggtggtggggcgatcagcagaggtggctcagccccca
caggatgtgccgcacagccagctgtttgatgcggagctctctgagccgctgacacccccc
cactcagctgtggccccccagccccagagtgggggcccctccacgaaggcgactgcgccc
tgcaggatcctgacccagcgtggcgggcaggggccagagtgctgggccaagctggacgag
tgcatgaccccgctccggcccgtcaagaagaggcagcggctcctgagcctgagggcgccg
ggggaggagagccgggtgctggggttcctcgggcgggcagagcctgggctgccccccgct
ggcaccgggcaggccaagtacgaagcagccatccgtggcgtgggcagtgcccagtcctgc
caggtccctgagctggtgccggccgaggcctctgccaggccggccctgatcccagccgag
gagtacgtgggggatgactggctggaggatgacctgggggcgagccgggagccccgcaag
aggagccaccggcgcccgggggagtcgggctcggactcagggggcaccagtgggtctgag
agcgacggcgcagcccccttcccagctgctctgccccagaagaggagggcccggcaaagc
cgcctcacccagatagtggacaggacgtcgctggctcggtcccgcgggggccaggccctg
gtggctccggagccagccgctggtctgaggcccgtagacggcagtggagaggccccacag
gccccactgctggctgcagccccgactcggccaccccccatccgagtgcgggtccgggtc
caagacaacatcttcctcatccccgtgccgcacagtggcctcgagagatgcccggtggcg
tggctggcagagcaggcggcccagcgccactaccaggcctgtggcctgctgccccagctc
accctcaagaaggaaggggcactgctggctccccaggatctcatcgtggacgtcctgcaa
agcaacgaggaggtgttggcagaggtgcagtcctgggacctgcccccgctcgccgaccgg
tatcgcaaggcctgttgcagcctggccgtgggcgagcaccggcttctgctgaagatgatg
gagctgcaggagtcgggcccctcgttcagcacctgtggcctctccttgcaccaaccccac
ctcaccccactcctgcgtgccctcaagctgcacagctccatccgccagctgcggctggct
gggacggggctggacgatggcctggctgccgagctgctggctacgctgggcaccatgccc
agcctggccctcctcgacctgtcggccaaccagctcggtgctgaggggctccgcgcgctg
gcagcagggctgccctcccaagcggtcttccagagcctggaagagctggacctcagcctg
aaccccctaggggacaagagctgcgaggccctggcctgcctggttcgagcctgcccggtc
ctgaccacgctccggctgcaggcctgtggcttctctgaggcttttgggcagcaccaccgc
ctcctgctggccaacagcctgaaaggagctgtgcacctgaagaccctcgctttgtcccac
aatgccctgggctccagcggcctgcagctgctgctcaggagtctgccctacgccaccctc
agccagctggagattggctcggtggtggcccgcctaggcgagcctctcgtggatccggtg
gtcaggtgcctaacacagcagggatgtgcgctcacccacctggctctctctgggaaccac
ctgaatgatgaggctgtcgcagagctggccaggtgcctcctggtttgtcccactttgatc
tccctggatttgtctgcgaacccagaggttaccagcgggggcttccagatgctgctgtca
gcgctgggggagaggcgccaggggctgcaatacctcagcctggcaggctgcagggtgcga
ggcccattggacagcaccacgtgggcccgggtctctgccaacgtgcgtgagctgcggctc
tgcagccggcagctgagcggcagcaaccagcggggcgtgggtgagtcctggcttggcccc
ccgggcacctctctgagcgcagtcacgcagcaccacaagctcttctgtaagagcatctga
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