KEGG   Carettochelys insculpta (pitted-shelled turtle): 142009052
Entry
142009052         CDS       T11194                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142009052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ciz04131]
    142009052
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ciz04147]
    142009052
Membrane trafficking [BR:ciz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    142009052
Exosome [BR:ciz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142009052
  Exosomal proteins of other body fluids (saliva and urine)
   142009052
  Exosomal proteins of colorectal cancer cells
   142009052
  Exosomal proteins of bladder cancer cells
   142009052
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 142009052
NCBI-ProteinID: XP_074842596
LinkDB
Position
2
AA seq 178 aa
MFRPSGHVLYCAPFPQLSTWSGTRLSLGNALCWGLYGACYPALSLPSLIVTLLLLQLDCP
LAMERIKEDRPITIKDDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETM
NRMSHLPPDFEGRQKVNQCRLQALSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHS
NT seq 537 nt   +upstreamnt  +downstreamnt
atgttcagaccgtctggccacgttctgtactgtgctcccttcccccagcttagcacatgg
agcggaacccggctttccctgggaaatgctctttgttgggggttatatggtgcttgttac
cctgccctgagcttgcccagcctcattgtaaccctccttctgctgcagctcgactgcccg
ctggccatggagaggatcaaggaggatcggccaatcaccatcaaggacgacaagggcaac
ctgaaccgctgcattgctgacatcgtctctcttttcatcacagtgatggacaagctgcgc
ctggagatccgagccatggatgagatccagccagacctgcgggagctgatggagacgatg
aaccgcatgagccacctacctcctgacttcgaggggagacagaaagtgaaccagtgcagg
ctgcaggcgctgagcggcatgtctgcctctgacgagctggacgattcccaagtgcgccag
atgctgtttgatttggaatccgcctacaatgccttcaaccggttcctgcactcctga

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