KEGG   Carettochelys insculpta (pitted-shelled turtle): 142009058
Entry
142009058         CDS       T11194                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142009058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ciz04131]
    142009058
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ciz04147]
    142009058
Membrane trafficking [BR:ciz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    142009058
Exosome [BR:ciz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142009058
  Exosomal proteins of other body fluids (saliva and urine)
   142009058
  Exosomal proteins of colorectal cancer cells
   142009058
  Exosomal proteins of bladder cancer cells
   142009058
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 142009058
NCBI-ProteinID: XP_074842603
LinkDB
Position
2:5241893..5390125
AA seq 243 aa
MCSGAIFQEAEVPLAAVPQPTTMFHGIPAAPGPGAPGNKPELYEEVKLYKNAREREKYDN
MAELFAVVKTMQALEKAYIKDCVSPNEYTAACSRLLVQYKAAFKQVQGSEIGSIDEFCRK
FRLDCPLAMERIKEDRPITIKDDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLR
ELMETMNRMSHLPLDFEGRQKVNQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRF
LHS
NT seq 732 nt   +upstreamnt  +downstreamnt
atgtgctccggcgccattttccaggaagcggaggtccccctggcagcagtgccccagccc
accacaatgttccacgggatccctgctgcacctggcccaggagccccagggaataagcca
gaactgtacgaggaggtgaagctgtataaaaatgcacgggagcgagaaaagtacgataac
atggctgagctgtttgcggtggtgaagacgatgcaggctctggagaaagcctatatcaag
gactgtgtctctcccaacgagtacaccgcagcctgctcccggctcctggtccagtacaaa
gctgccttcaaacaggtacagggatccgaaattggctccatcgatgaattttgccgcaag
ttccggctcgactgcccgctggccatggagaggatcaaggaggatcggccaatcaccatc
aaggacgacaagggcaacctgaaccgctgcattgctgacatcgtctctcttttcatcaca
gtgatggacaagctgcgcctggagatccgagccatggatgagatccagccagacctgcgg
gagctgatggagacgatgaaccgcatgagccacctacctcttgacttcgaggggagacag
aaagtgaaccagtggctgcagacgctgagcggcatgtctgcctctgacgagctggacgat
tcccaagtgcgccagatgctgtttgatttggaatccgcctacaatgccttcaaccggttc
ctgcactcctga

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