Carettochelys insculpta (pitted-shelled turtle): 142009144
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Entry
142009144 CDS
T11194
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142009144 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
142009144
NCBI-ProteinID:
XP_074842823
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Position
2:27730935..27927233
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AA seq
537 aa
AA seq
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MAVAAGGRAQRSGWLEVLVRDRWHKVLANLGEDALVLSCEERADGAAHNGLGTSGNGAPC
RGNPGGAAESLGGGGSSSSSPQAGGGGPGVRTAFTELPDQVPDAVSNKKRCVKVLKQELG
GLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILAVNGTDLRDATHDEAVQALK
RAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGVASDPLSQLSLSINRDR
KTIPLKMCYVTRNMTVSDPENRLLEVHSPDAKHTVVLRSKDSATAQAWFNAIHSSVNDLI
PKVIAEVKDQLGKSGIAGSREIRHLGWLAEKVPGENEKHWKPALVVLTEKDFLIYDSMPR
MKEAWFNPLRTYPLLATRLVHSGPGKGSPQSGVDLSFATRTGTRQGIETHLFRTETSRDL
SLWTRNIVQGCHNSAELITEIATPCTYKNQECRLTIHYDHGFSLTVEPQDGALSKTIVQC
PYEKLKMSSDDGIRMLYLDFGGKDGEFQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcgggcggccgggcgcagcgcagcggctggctggaagtcctggtgcgg
gaccgctggcacaaggtcctggccaatttgggcgaggacgccctggtgctgagctgcgag
gagcgcgccgacggcgcagcccacaacggcctcgggaccagcggcaacggggcgccctgc
cggggtaaccccggcggggcagccgagtccctcggcggcggcggcagcagcagcagcagc
ccccaggcggggggtggcggccctggggtgcgcaccgccttcaccgagctccccgaccaa
gtgcccgacgctgtctcgaacaagaagcggtgcgtgaaggtgctgaagcaggagctgggc
gggctgggcatcagcatcaagggcggcaaggagaacaagatgcccatcctcatcagcaag
atcttcaaggggctggcggccgaccagacccaggccctctacgtgggcgatgccatcctg
gccgtgaacggcacagacctgcgggacgccacccacgacgaggcggtgcaggcgctcaag
cgggcgggcaaggaggtgctgctggaagtgaagtacatgcgagaagcaactccgtatgtg
aagaaaggttctccggtttcggaaattgggtgggaaacgccacccccggaatctcctcgg
ttgggaggtgtagcctctgacccgctgtcgcagctttctctctccatcaacagagacaga
aaaacaattccacttaaaatgtgctatgtgacacgcaacatgactgtgtcagatccagaa
aacaggcttcttgaagttcattcacctgacgccaagcacactgtggttctaaggagtaaa
gattcagccacagcccaggcctggttcaatgcgatccactccagtgttaatgatcttatt
cctaaggtgatcgcagaggtgaaagaccagctgggtaaaagcgggattgctggaagtcgt
gagatcagacatctaggctggcttgcggaaaaggtgccgggagagaatgagaaacactgg
aagccagcactggttgtactgaccgagaaggactttttaatttatgacagcatgccacga
atgaaagaagcttggttcaaccctctgcgtacttaccctctgctagccaccaggttggtc
cattcaggcccaggtaagggatccccacaatctggggtggatttgtcttttgcaacacgc
actggtacacggcaagggattgagacgcatctcttcaggacagagactagcagagacctc
tccctgtggacaagaaacatcgttcagggctgccacaactcagctgagctcatcacagaa
atcgcaaccccttgcacctacaaaaaccaggagtgccgtctgaccatccattacgaccat
ggattctctctcacagttgaaccacaagatggtgccttgtccaaaacaattgtacagtgt
ccctatgagaaactaaaaatgtcttcagacgatggcattaggatgctttatttagacttt
ggaggcaaagatggagaatttcaactggaccttcattcttgtccaaagccaattgtgttc
atcattcattcattcctttcagctaagattacaagacttggtttggtggcataa
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