Carettochelys insculpta (pitted-shelled turtle): 142009310
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Entry
142009310 CDS
T11194
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ciz03036
]
142009310 (CHD7)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142009310 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
142009310
NCBI-ProteinID:
XP_074843253
LinkDB
All DBs
Position
2:complement(71099401..71322373)
Genome browser
AA seq
3014 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLESLGECGYPENTVNPMGQQMPIDQGFPSLQSSLHHPPSS
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMMSNAPGNGIASPHSQYHNPPVPQVPHGSGTG
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQPTQPPQTPSGPPGPG
HPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQAQEGLNQGNPFIATSGPGHLSHVPQ
QNPNMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQTVP
SPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYTNAVGFPSNSSQG
LMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGI
PMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSTPREMGGHMRPNGC
PGVGLADPQAIQERLISGQQHPSQQPSFQQQMPTCPPMPPHPGIHHQPSPPPHPHHQPWA
QLHQSPQNTPQKVPVLQHSPSEPFAEKPVPDMTQVSGLTTQLVKKDDYLPSIEQQPQQKK
KKKKNNHILAEGSSKGFGKEDFPGGLASQDQTRNLLDCSQEEKKKKKKPKSKKEPKDPKE
PKEKKEPKEPKPPKPPKIPKEPKEKKARNTTSKPKTSKKMSNKKPDSEASSLKKKVNKGK
EGSENSDLEKTPPPSPHEDDDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGR
DSPSNTSQSELQESADAEGPVVEKIMSSRSVKKQLENGEEVETEEFYVKYKNFSYLHCQW
ASIEELDKDKRIQQKVKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDVSHSTDDNGQP
VTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPQMERVERPPADDWKKSESSR
EYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFL
VIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAI
ITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNT
VEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP
KEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLING
AEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLD
ILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQ
SMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITI
ESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRK
QTRLYSAVKEDELMEFSDLESDSEEKPCSKPRRPQDKSQGYARSECFRVEKNLLVYGWGR
WTDILSHGRYKRPLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALV
NHSGLSAPVPRGRKGKKVKAQSSQPVLQDADWLTSCNPDVLFQEDSYKKHLKHHCNKVLL
RVRMLYYLRQEVIGDQADKILEGADSRYHCHSSEVDVWIPEPFHAEVPADWWDKEADKSL
LIGVFKHGYEKYNSMRADPTLCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDED
PEYKPTRTPFKDEIDEFANSPPEDKEESIESHTTSKHSESNAELGQLYWPTTSTLTTRLR
RLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADF
YRVVSTFGVIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFTCFVTMCRRVCRMPAKPDE
EPPDLATMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECG
KHDKDLLIGAAKHGVSRTDYHILNDPELSFLDAHRNFAQNRGAGNAGSMSSLNPLGPGCS
QTPPIVPSTPVQDDKAAEQVESKVEGSENAAAKEKSDMKEETDIAEKVIKQECDAEAEPG
PIKCERKAIELNTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQLEAGTVSQGKNFDEES
NASMSTARDETRDGFYLEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKW
PVNRRQMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASMSASEDITSSPQLSKEDAL
NLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKIVDLSKASREAT
SSTSNFSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLMDGEPPMKRR
RGRRKNVEGLDLLFMSNKRTSLTVEDAEVTKAFEDDMETAPARNIPSPGQLDPDSRIPVI
NLEDGTRLVGEDAPKNKDLIEWLKSHPTYTIDMPSYVPKSADVLFSPFQKPKQKRHRCRN
PNKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQS
GFVPESMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAG
MDLTSLQNLQNLQSLQLAGLMGFPPGLATAAAAGGDSKNPAAMLPLMLPGMAGLPNMFGL
GGLLNNPITAATGNTTPASSQGETEDGTSKAEEKKNENEEENKDSEKSTDVVSATDSANG
SVSAATAAAAASTTSNNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPG
LAGLQNAVSSNEEKATDKTEGAAFKEEENLEGSDAEESLDKTADSSILEDEIAQGEELDS
LDGGEEIENNENDE
NT seq
9045 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccaggaatgatgagtctatttggagaagacgggaatattttcagcgaaggg
ctggaaagtcttggagaatgtggatatcctgaaaatacagtaaatcctatggggcagcaa
atgcccatagatcaaggattcccctccttacagtcttctcttcaccatcctccctccagt
caaaatcaagcaaagttgacccactttgatcactataatcagtatgaacagcaaaaaatg
catttgatggatcagcctaacagaatgatgagtaacgctcctgggaatggtatagcatct
cctcactcacagtaccacaaccctccagttcctcaggttcctcatggcagtggcactggt
ggtcagatgggagtctatcctagtatgcagaatgaaaggcatgggcaaccctttgtagac
agtggctccatgtgggggccacgggctgttcaggtgcctgaccaaataagagcaccatac
cagcagcagcagcaaccgacgcagccaccacagactccgtcaggaccccctgggcccggc
catcctcagcacatgcagcaaatgggaaactacatggctcgtggtgatttttcaatgcag
cagcacggtcagccacagcagcagaggatgaaccagttttctcaagctcaagaaggtctt
aatcagggaaatcctttcattgccacctcaggacctggccacttgtctcatgtgccccaa
cagaatcccaacatggcaccttctttgcgacactcagtccaacaatttcaccaccatccc
cctaccgcgctccatggagaatcagtagcccacagtcccagattctcccctaaccctcct
cagcagggtgctgttcggccacaaacacttaattttagttctcggagccagacagtaccc
tcacctactataaacaactcagggcagtattctcggtatccttacagtaacctaaatcag
ggattagttaacaatacagggatgaatcagaatttaggccttacaaataacactccaatg
aatcagtctgtaccaagatacacaaatgctgtaggatttccatcaaacagcagtcaagga
ctaatgcaccagcagcccattcaccctagtggctcactcaaccaaatgaacacgcaaact
atgcatccttcacagcctcagggaacttatgcctctccacctcccatgtcacctatgaaa
gcaatgagtaatccagcaggtacaccccctccgcaggttaggcctggtagtgctggaata
ccaatggaagttggcagttatccaaatataccccatcctcagccatcacaccagccccct
ggtgccatgggaattggacagaggaatatgggcccccgaaacatgcagcagagtcgtccg
tttatgggtatgtcttcaactccacgggagatgggtgggcacatgagaccaaatggttgt
ccaggtgttggccttgcagatccacaagcaatacaagagcgactgatatctggccagcaa
catcccagccaacagccatcttttcaacagcaaatgccaacctgcccccccatgccacct
catccagggatacatcatcagccttcacctccaccacatccacaccaccagccgtgggca
cagcttcaccagtccccacagaatacaccacaaaaagtgcctgtccttcagcattctcca
tcggagccctttgcagagaaaccagtgccggatatgactcaggttagtggactgactact
cagctagtgaaaaaggatgactacctgccatccattgaacagcagcctcagcagaagaag
aagaagaaaaaaaacaatcacattcttgctgagggttccagtaaaggttttggtaaagag
gattttcctggtggtcttgccagccaggatcaaaccaggaacttgttggattgctcccaa
gaagagaaaaagaaaaagaagaagcccaagtcaaaaaaggagccgaaggatcctaaagag
cctaaggaaaagaaggagcctaaagaacccaagcctccaaaaccccccaagattcccaaa
gaaccaaaggaaaagaaagcaaggaacaccacatcgaaacccaagaccagcaaaaagatg
agtaacaagaaaccagactccgaagcaagttcactgaagaaaaaagtcaacaaaggaaaa
gaaggttctgagaactcagatttagaaaaaacaccaccaccatctcctcacgaagatgac
gatgacccaggtgttcagaagagacgatccagcaggcaggttaagagaaaacgttacaca
gaagacttggagttcaagatttcagacgaggaagctgatgatgctgatgctgcaggaaga
gactccccttcaaatacatctcagtcagagctacaggaatcagctgatgctgaaggtcca
gtagtagagaaaatcatgagtagtcgttcagtcaagaaacagttggagaatggagaggaa
gtggaaacagaggaattctatgtaaaatacaaaaacttctcttaccttcattgtcagtgg
gcatctattgaagaattggacaaagacaagagaattcagcaaaaagttaagcggtttaag
gcaaagcagggtcagaacaagttcctctcagagatagatgatgagctctttaatccagac
tatgtggaagtcgatagaataatggatgtttcacatagcacagatgataatggacagcct
gttactcattatctggtgaagtggtgttcacttccttatgaagacagtacttgggagcta
aagcaagacatagaccaagctaagattgaagaatttgagaaactgatgtctagggagcca
caaatggagcgtgtggagcgacctcctgctgatgactggaagaaatcggagagttccagg
gagtataaaaacaataacaaactcagggaataccagttggagggagtaaactggcttctt
ttcaactggtacaacacgagaaactgcattttagcagacgaaatggggttgggaaaaact
atccagtctattacctttctctatgagatatatttgaaaggaatccatggtcctttcttg
gttattgctccactgtccacaatccccaactgggaaagggagttccgcacctggacagag
ctgaatgttgttgtatatcatgggagtcaagccagccggcggaccattcagttgtatgaa
atgtacttcaaagatccacagggtcgggtaataaaggggtcctataagtttcatgctatc
atcactacatttgaaatgattttgacggattgccctgagctgcgtaacattccatggcgt
tgtgtggtaattgatgaagcccacaggctaaagaataggaattgcaagctcttagaagga
ctaaagatgatggacctggaacacaaggttctgcttactggtaccccactacagaacact
gtagaagagctgtttagcttgcttcatttcctggagccaggtcgcttcccatcagaaacc
acattcatgcaggagtttggtgatctgaaaactgaagaacaggttcaaaagctacaagcc
attttgaagccgatgatgttgaggcgtctcaaagaggacgtggagaagaacttggccccc
aaagaagaaacaatcattgaagttgagctgacaaacattcagaaaaaatactatcgtgct
attcttgagaagaatttcacatttctctccaagggtggtggtcaagctaatgtacctaat
cttttaaacactatgatggaactaagaaaatgctgcaatcatccatatcttattaatggt
gctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctccagatttt
cagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctgctgcca
aaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgttgcttggac
atactggaagactacctcattcaaagacggtacccatacgagcgaattgatggtcgagta
agaggcaaccttcgtcaggcagctattgacaggttttccagacctgattctgatagattt
gttttcctgctgtgtacaagggcaggaggtttaggcattaatcttactgctgctgacacc
tgcatcatctttgattcagactggaatccccaaaatgacctccaggctcaagctcgatgc
cacagaattggacagagcaaatcagtgaaaatctaccggttgattacacggaattcttat
gaaagagaaatgtttgacaaagctagtttaaagctgggccttgataaagctgtactgcag
tctatgagtggaagagaaaatgctacaaatggggtacagcagctttctaagaaagaaata
gaagatcttctacgaaagggggcttatggtgctcttatggatgaggaggatgagggttcc
aagttctgtgaggaagacattgatcagattctcctaaggcgaacgcacacaattactatt
gagtctgaaggcaagggctcaacatttgcaaaggctagctttgttgcatctggaaacagg
acagacatctccttggatgaccctaatttctggcagaagtgggctaagaaggctgagttg
gatattgatgccttaaatggaaggaacaacctagttattgatacaccaagagtaagaaag
caaaccagactgtatagtgcagtcaaagaagatgaactaatggagttttcagacctggaa
agtgattctgaagaaaagccttgttcaaagccccgtagacctcaggacaaatcccagggt
tatgcaaggagtgaatgttttagagtggagaagaaccttttggtctatgggtggggtcga
tggacagacatcctctcacacgggcgttataaacgtccgctgacagaacaagacgtcgaa
accatctgtcggacaatcctggtgtattgtcttaatcattacaaaggggatgaaaatatc
aaaagtttcatatgggatctgatcactccaactgcagatggacaaacgcgagccttggtt
aatcactccggtctatctgcaccagtgcccaggggaaggaaaggcaaaaaagtgaaagcc
cagagttcacaaccagtattgcaagatgctgattggttgacaagctgtaacccagatgtc
ttgtttcaagaggacagctataagaaacacctcaaacatcactgtaataaggtcctgctg
cgtgtccgcatgctgtactatctaagacaagaagttataggggaccaagcagacaagatc
ttagagggtgcagattcaaggtaccactgtcattccagtgaagtagacgtgtggatacct
gaaccgttccatgctgaggttcctgcagactggtgggataaagaagcagataaatccctt
ttaattggagtattcaaacatggctatgagaagtacaattctatgagagctgaccctacc
ctgtgctttctggagcgggttggtatgcctgatgccaaggccatagctgctgagcagaga
gggacagacatgttagcagatggtggtgatgggggagagtttgacagagaggatgaggat
ccagaatataaaccaaccagaactcctttcaaggatgaaattgatgaatttgcaaactca
cctccagaagataaagaagaatccatagagagccacacaacaagcaagcacagtgaaagc
aatgctgagttaggccaactctactggcccaccacttcaaccctgactacccgtctacgc
cgcctcattactgcctatcagcgcagctataaaaggcaacaaatgaggcaagaggcacta
atgaagactgaccgacgaagacgtcggcctagggaggaagtgagagcactagaagcagaa
cgagaagcgataataactgaaaaacgtcaaaaatggacaagaagagaagaagcagatttt
tatcgtgtagtgtctacttttggggttatctttgaccctatgaaacaacaatttgattgg
aaccagttcagagcttttgctaggcttgataagaagtctgatgagagtttggagaagtac
tttacttgttttgtgaccatgtgcaggcgggtatgccggatgccagcaaaaccagatgaa
gaacctccagatcttgccaccatgattgaaccaatcacagaggagcgtgcttcgagaact
ttatatcgcatagaactgttacggaaaattcgtgagcaggttctccatcaccctcagttg
ggggagaggctaaaattgtgccagccaagcttggatctgccagagtggtgggagtgtggt
aaacacgacaaagacttactgattggtgctgctaaacatggagtcagtaggacagattat
cacattctgaatgaccctgaactctcttttcttgatgcccacagaaattttgctcaaaac
agaggtgcaggtaatgcaggtagtatgtcttcattaaacccactgggtcctggctgcagt
caaacaccccctattgtcccatccacaccagtacaagatgacaaggctgcagaacaagtt
gagtctaaagttgaggggtctgaaaatgcggcagccaaagaaaagtctgatatgaaagag
gagacagatattgcagaaaaggtcattaagcaggaatgtgatgctgaggctgagcctgga
cctattaaatgtgaaaggaaagcaatagaactgaatacagatgtagatccaaaatctatt
tctgaaaaaggttcagaagaggatgaagaggagaaacttgatgatgatgacaaatcagaa
gagtcttcccaactggaagcaggaacagtttctcagggtaagaatttcgatgaagaaagc
aacgcatctatgagcactgcaagggatgaaactcgtgatggattctacttggaagatgga
gatccttcagttgctcagttgcttcatgagagaacatttgccttttctttctggcctaag
gaccgagtaatgatcaaccgattagacaacatctgtgaagcagtgctaaaggggaagtgg
ccagtaaataggcgacagatgtttgatttccaggggctcatacctgggtatactccaaca
gctgtggacagccctctacagaaaagaagtttcgcagagctctccatggttggtcaagcc
agcatgagtgccagtgaagatatcacatcttctcctcagttatcaaaggaagatgcactc
aatttgtcagttcctcgtcagcgaaggaggagacggagaaagattgaaattgaagctgag
agagctgccaagaggagaaatcttatggaaatggttgctcagttacgagagtctcaggtg
gtttcagaaaatggacaagaaaaaattgtagatttatcaaaggcctcgcgagaggcaaca
agttctacctcaaatttttcatctgttacttctaagtttattttacctaatgtctccaca
cctgtgtctgatgcctttaaaactcaaatggaactgctgcaagcaggtctttcacgcaca
cccacaaggcatctactaaatggctctttaatggatggagaaccgcccatgaagaggagg
agaggaaggaggaaaaatgtagaagggctcgatctattgtttatgagcaacaaacggaca
tcgctgactgttgaggatgcagaagtgaccaaagcatttgaagatgatatggagactgca
ccagcaagaaacattccatctcctggacaactggacccagacagtcggatccctgtaatt
aacttagaagatgggaccaggctggtgggagaggatgctcctaaaaacaaggatttaatt
gaatggctaaaatcgcatcctacctatactattgatatgccaagttatgtaccaaagagt
gcagatgtgctgttttccccatttcagaagccgaagcaaaaaagacacaggtgtcgaaac
cctaataaattggatataaataccttgacaggagaagagagggtacctgttgtaaataaa
cgaaatggaaagaagatgggtggagctatggctcctccaatgaaggacctgccaaggtgg
ttggaagaaaatcctgaatttgccgttgctccagattggactgatattgttaagcagtct
ggttttgttccagagtccatgtttgaccgtcttctcacaggaccggttgtgagagaagaa
ggagcaagcagaagaggaagaaggccaaaaagtgaaattgccaaagcagctgcagcagct
gccgctgtagcttcaacttcgggaatcaatccactgctaatgaacagcctatttgctgga
atggacctcacaagccttcagaacctacagaatctgcagtctctacagcttgcaggtctc
atgggcttccctccaggactagcaacagctgcggctgctggaggtgattctaaaaatcca
gctgccatgctgcctctgatgttgccaggtatggcaggattgcccaacatgtttggactg
ggtggattgctgaataacccgataacagctgctactggaaacaccactcctgcttccagt
caaggagaaactgaagatggcacttcaaaagcagaagagaagaaaaatgagaatgaggag
gagaacaaagactctgagaaaagcacagatgttgtttctgctactgactctgcaaatgga
tctgtcagtgctgctactgctgctgccgctgccagcaccaccagcaacaacactggattg
cccacaaaccctctggccttcaatcctttcctgttgtccaccatggctcctggcctgttc
tatccatctatgtttctacctccaggactggggggattgacgctgcctggtttcccagga
ttagctggacttcagaatgcagtgagctccaatgaagaaaaggctactgacaaaacagaa
ggggctgcctttaaagaagaggagaatttagaaggcagtgatgcagaggagagccttgat
aaaactgcagattcctccattttagaagatgaaatagcacagggtgaagaattagactcg
cttgatgggggggaggaaatagagaacaatgaaaatgacgaataa
DBGET
integrated database retrieval system
